Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps39Q8R5L3 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps39Q8R5L3 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Vps39Q8R5L3 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps39Q8R5L3 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps39Q8R5L3 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps39Q8R5L3 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps39Q8R5L3 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.3□□□□□ -0.44
Vps39Q8R5L3 Gm6222-202ENSMUST00000182143 629 ntBASIC12.3□□□□□ -0.44
Vps39Q8R5L3 Gm45784-201ENSMUST00000188360 142 ntBASIC12.3□□□□□ -0.44
Vps39Q8R5L3 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.3□□□□□ -0.44
Vps39Q8R5L3 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.3□□□□□ -0.44
Vps39Q8R5L3 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps39Q8R5L3 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.3□□□□□ -0.44
Vps39Q8R5L3 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps39Q8R5L3 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Vps39Q8R5L3 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps39Q8R5L3 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps39Q8R5L3 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Vps39Q8R5L3 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps39Q8R5L3 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps39Q8R5L3 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps39Q8R5L3 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Vps39Q8R5L3 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps39Q8R5L3 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps39Q8R5L3 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Vps39Q8R5L3 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vps39Q8R5L3 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps39Q8R5L3 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps39Q8R5L3 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.3□□□□□ -0.44
Vps39Q8R5L3 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Vps39Q8R5L3 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.3□□□□□ -0.44
Vps39Q8R5L3 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps39Q8R5L3 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vps39Q8R5L3 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.29□□□□□ -0.44
Vps39Q8R5L3 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Vps39Q8R5L3 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vps39Q8R5L3 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps39Q8R5L3 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps39Q8R5L3 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps39Q8R5L3 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps39Q8R5L3 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vps39Q8R5L3 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Vps39Q8R5L3 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps39Q8R5L3 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vps39Q8R5L3 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Vps39Q8R5L3 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.29□□□□□ -0.44
Vps39Q8R5L3 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.29□□□□□ -0.44
Vps39Q8R5L3 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps39Q8R5L3 Gm15824-201ENSMUST00000119516 955 ntBASIC12.29□□□□□ -0.44
Vps39Q8R5L3 Gm13342-201ENSMUST00000121055 207 ntBASIC12.29□□□□□ -0.44
Vps39Q8R5L3 Gm25261-201ENSMUST00000157416 134 ntBASIC12.29□□□□□ -0.44
Vps39Q8R5L3 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.29□□□□□ -0.44
Vps39Q8R5L3 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.29□□□□□ -0.44
Vps39Q8R5L3 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.29□□□□□ -0.44
Vps39Q8R5L3 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Vps39Q8R5L3 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps39Q8R5L3 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.29□□□□□ -0.44
Vps39Q8R5L3 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps39Q8R5L3 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vps39Q8R5L3 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps39Q8R5L3 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.29□□□□□ -0.44
Vps39Q8R5L3 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Vps39Q8R5L3 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vps39Q8R5L3 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps39Q8R5L3 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Vps39Q8R5L3 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vps39Q8R5L3 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps39Q8R5L3 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Vps39Q8R5L3 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vps39Q8R5L3 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vps39Q8R5L3 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps39Q8R5L3 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Vps39Q8R5L3 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Gm5745-201ENSMUST00000183748 313 ntBASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms