Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ebf4Q8K4J2 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Ebf4Q8K4J2 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ebf4Q8K4J2 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ebf4Q8K4J2 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ebf4Q8K4J2 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ebf4Q8K4J2 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ebf4Q8K4J2 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ebf4Q8K4J2 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Ebf4Q8K4J2 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.17□□□□□ -0.62
Ebf4Q8K4J2 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Ebf4Q8K4J2 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ebf4Q8K4J2 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Ebf4Q8K4J2 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Ebf4Q8K4J2 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ebf4Q8K4J2 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ebf4Q8K4J2 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 Gm23363-201ENSMUST00000175024 79 ntBASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 Gm9797-201ENSMUST00000052902 613 ntBASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf4Q8K4J2 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ebf4Q8K4J2 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ebf4Q8K4J2 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.15□□□□□ -0.62
Ebf4Q8K4J2 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ebf4Q8K4J2 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ebf4Q8K4J2 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ebf4Q8K4J2 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ebf4Q8K4J2 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ebf4Q8K4J2 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ebf4Q8K4J2 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ebf4Q8K4J2 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Ebf4Q8K4J2 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Ebf4Q8K4J2 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ebf4Q8K4J2 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ebf4Q8K4J2 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ebf4Q8K4J2 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ebf4Q8K4J2 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ebf4Q8K4J2 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.62
Ebf4Q8K4J2 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ebf4Q8K4J2 Gm14057-201ENSMUST00000120631 482 ntBASIC11.15□□□□□ -0.62
Ebf4Q8K4J2 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ebf4Q8K4J2 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC11.15□□□□□ -0.62
Ebf4Q8K4J2 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ebf4Q8K4J2 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC11.15□□□□□ -0.62
Ebf4Q8K4J2 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.15□□□□□ -0.62
Ebf4Q8K4J2 Gm4034-201ENSMUST00000187674 480 ntBASIC11.15□□□□□ -0.62
Ebf4Q8K4J2 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.15□□□□□ -0.62
Ebf4Q8K4J2 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ebf4Q8K4J2 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.15□□□□□ -0.62
Ebf4Q8K4J2 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ebf4Q8K4J2 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Ebf4Q8K4J2 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.15□□□□□ -0.62
Ebf4Q8K4J2 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ebf4Q8K4J2 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ebf4Q8K4J2 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ebf4Q8K4J2 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms