Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CopaQ8CIE6 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
CopaQ8CIE6 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CopaQ8CIE6 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CopaQ8CIE6 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CopaQ8CIE6 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
CopaQ8CIE6 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CopaQ8CIE6 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CopaQ8CIE6 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.57□□□□□ -0.4
CopaQ8CIE6 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CopaQ8CIE6 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CopaQ8CIE6 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CopaQ8CIE6 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CopaQ8CIE6 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CopaQ8CIE6 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CopaQ8CIE6 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CopaQ8CIE6 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CopaQ8CIE6 Gm11531-201ENSMUST00000117614 555 ntBASIC12.57□□□□□ -0.4
CopaQ8CIE6 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CopaQ8CIE6 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.57□□□□□ -0.4
CopaQ8CIE6 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.57□□□□□ -0.4
CopaQ8CIE6 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.57□□□□□ -0.4
CopaQ8CIE6 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CopaQ8CIE6 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.57□□□□□ -0.4
CopaQ8CIE6 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.57□□□□□ -0.4
CopaQ8CIE6 Gm5904-201ENSMUST00000210286 865 ntBASIC12.57□□□□□ -0.4
CopaQ8CIE6 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CopaQ8CIE6 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CopaQ8CIE6 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CopaQ8CIE6 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CopaQ8CIE6 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
CopaQ8CIE6 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CopaQ8CIE6 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CopaQ8CIE6 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CopaQ8CIE6 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CopaQ8CIE6 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CopaQ8CIE6 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CopaQ8CIE6 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.57□□□□□ -0.4
CopaQ8CIE6 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
CopaQ8CIE6 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.57□□□□□ -0.4
CopaQ8CIE6 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CopaQ8CIE6 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CopaQ8CIE6 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CopaQ8CIE6 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CopaQ8CIE6 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CopaQ8CIE6 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CopaQ8CIE6 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CopaQ8CIE6 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.57□□□□□ -0.4
CopaQ8CIE6 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CopaQ8CIE6 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CopaQ8CIE6 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CopaQ8CIE6 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.56□□□□□ -0.4
CopaQ8CIE6 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.56□□□□□ -0.4
CopaQ8CIE6 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CopaQ8CIE6 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
CopaQ8CIE6 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CopaQ8CIE6 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.56□□□□□ -0.4
CopaQ8CIE6 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CopaQ8CIE6 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CopaQ8CIE6 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CopaQ8CIE6 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CopaQ8CIE6 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CopaQ8CIE6 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CopaQ8CIE6 Gm25214-201ENSMUST00000104573 129 ntBASIC12.56□□□□□ -0.4
CopaQ8CIE6 Gm12291-201ENSMUST00000121627 311 ntBASIC12.56□□□□□ -0.4
CopaQ8CIE6 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.56□□□□□ -0.4
CopaQ8CIE6 Gm26956-201ENSMUST00000182176 986 ntBASIC12.56□□□□□ -0.4
CopaQ8CIE6 Gm2546-201ENSMUST00000182630 991 ntBASIC12.56□□□□□ -0.4
CopaQ8CIE6 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.56□□□□□ -0.4
CopaQ8CIE6 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.56□□□□□ -0.4
CopaQ8CIE6 Gm18827-201ENSMUST00000188341 790 ntBASIC12.56□□□□□ -0.4
CopaQ8CIE6 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.56□□□□□ -0.4
CopaQ8CIE6 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CopaQ8CIE6 Gm5950-201ENSMUST00000213337 772 ntBASIC12.56□□□□□ -0.4
CopaQ8CIE6 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.56□□□□□ -0.4
CopaQ8CIE6 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.56□□□□□ -0.4
CopaQ8CIE6 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CopaQ8CIE6 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CopaQ8CIE6 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CopaQ8CIE6 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.56□□□□□ -0.4
CopaQ8CIE6 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CopaQ8CIE6 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CopaQ8CIE6 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
CopaQ8CIE6 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.56□□□□□ -0.4
CopaQ8CIE6 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CopaQ8CIE6 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CopaQ8CIE6 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CopaQ8CIE6 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CopaQ8CIE6 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CopaQ8CIE6 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CopaQ8CIE6 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CopaQ8CIE6 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.56□□□□□ -0.4
CopaQ8CIE6 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CopaQ8CIE6 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CopaQ8CIE6 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.56□□□□□ -0.4
CopaQ8CIE6 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.56□□□□□ -0.4
CopaQ8CIE6 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CopaQ8CIE6 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CopaQ8CIE6 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CopaQ8CIE6 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms