Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rftn2Q8CHX7 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rftn2Q8CHX7 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rftn2Q8CHX7 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rftn2Q8CHX7 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC13.03□□□□□ -0.32
Rftn2Q8CHX7 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rftn2Q8CHX7 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.03□□□□□ -0.32
Rftn2Q8CHX7 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rftn2Q8CHX7 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rftn2Q8CHX7 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rftn2Q8CHX7 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rftn2Q8CHX7 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rftn2Q8CHX7 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rftn2Q8CHX7 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rftn2Q8CHX7 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rftn2Q8CHX7 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Rftn2Q8CHX7 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Rftn2Q8CHX7 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
Rftn2Q8CHX7 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Rftn2Q8CHX7 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Rftn2Q8CHX7 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rftn2Q8CHX7 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13.02□□□□□ -0.33
Rftn2Q8CHX7 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Rftn2Q8CHX7 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.33
Rftn2Q8CHX7 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Rftn2Q8CHX7 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rftn2Q8CHX7 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.33
Rftn2Q8CHX7 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC13.02□□□□□ -0.33
Rftn2Q8CHX7 Gm6039-201ENSMUST00000121667 1250 ntBASIC13.02□□□□□ -0.33
Rftn2Q8CHX7 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rftn2Q8CHX7 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rftn2Q8CHX7 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rftn2Q8CHX7 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rftn2Q8CHX7 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Rftn2Q8CHX7 Gm26448-201ENSMUST00000082446 203 ntBASIC13.02□□□□□ -0.33
Rftn2Q8CHX7 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rftn2Q8CHX7 Gm5525-201ENSMUST00000190438 1312 ntBASIC13.02□□□□□ -0.33
Rftn2Q8CHX7 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rftn2Q8CHX7 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rftn2Q8CHX7 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rftn2Q8CHX7 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rftn2Q8CHX7 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Rftn2Q8CHX7 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.02□□□□□ -0.33
Rftn2Q8CHX7 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Rftn2Q8CHX7 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rftn2Q8CHX7 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Rftn2Q8CHX7 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rftn2Q8CHX7 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Rftn2Q8CHX7 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rftn2Q8CHX7 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.02□□□□□ -0.33
Rftn2Q8CHX7 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rftn2Q8CHX7 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rftn2Q8CHX7 Gm8038-201ENSMUST00000164674 2044 ntBASIC13.01□□□□□ -0.33
Rftn2Q8CHX7 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rftn2Q8CHX7 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rftn2Q8CHX7 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Rftn2Q8CHX7 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Rftn2Q8CHX7 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rftn2Q8CHX7 Gm23596-201ENSMUST00000104304 132 ntBASIC13.01□□□□□ -0.33
Rftn2Q8CHX7 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC13.01□□□□□ -0.33
Rftn2Q8CHX7 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rftn2Q8CHX7 Gm42629-201ENSMUST00000199063 1102 ntBASIC13.01□□□□□ -0.33
Rftn2Q8CHX7 Gm43378-201ENSMUST00000199336 582 ntBASIC13.01□□□□□ -0.33
Rftn2Q8CHX7 AC131330.1-201ENSMUST00000227814 1015 ntBASIC13.01□□□□□ -0.33
Rftn2Q8CHX7 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rftn2Q8CHX7 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rftn2Q8CHX7 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rftn2Q8CHX7 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Rftn2Q8CHX7 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rftn2Q8CHX7 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rftn2Q8CHX7 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rftn2Q8CHX7 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rftn2Q8CHX7 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rftn2Q8CHX7 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.01□□□□□ -0.33
Rftn2Q8CHX7 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Rftn2Q8CHX7 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rftn2Q8CHX7 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rftn2Q8CHX7 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.01□□□□□ -0.33
Rftn2Q8CHX7 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rftn2Q8CHX7 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Rftn2Q8CHX7 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
Rftn2Q8CHX7 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rftn2Q8CHX7 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rftn2Q8CHX7 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Rftn2Q8CHX7 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rftn2Q8CHX7 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Rftn2Q8CHX7 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rftn2Q8CHX7 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Rftn2Q8CHX7 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Rftn2Q8CHX7 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rftn2Q8CHX7 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rftn2Q8CHX7 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Rftn2Q8CHX7 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rftn2Q8CHX7 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rftn2Q8CHX7 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rftn2Q8CHX7 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rftn2Q8CHX7 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rftn2Q8CHX7 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Rftn2Q8CHX7 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Rftn2Q8CHX7 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms