Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Gm43818-201ENSMUST00000200605 466 ntBASIC15.15■□□□□ 0.02
Smc5Q8CG46 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC15.15■□□□□ 0.02
Smc5Q8CG46 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC15.15■□□□□ 0.02
Smc5Q8CG46 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc5Q8CG46 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC15.15■□□□□ 0.02
Smc5Q8CG46 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc5Q8CG46 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smc5Q8CG46 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc5Q8CG46 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc5Q8CG46 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smc5Q8CG46 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc5Q8CG46 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc5Q8CG46 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC15.15■□□□□ 0.02
Smc5Q8CG46 Gm15163-201ENSMUST00000120749 1302 ntBASIC15.15■□□□□ 0.02
Smc5Q8CG46 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Smc5Q8CG46 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc5Q8CG46 Gm38194-201ENSMUST00000194529 2211 ntBASIC15.15■□□□□ 0.02
Smc5Q8CG46 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc5Q8CG46 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smc5Q8CG46 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Smc5Q8CG46 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smc5Q8CG46 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Smc5Q8CG46 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smc5Q8CG46 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smc5Q8CG46 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smc5Q8CG46 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smc5Q8CG46 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Smc5Q8CG46 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smc5Q8CG46 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smc5Q8CG46 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC15.14■□□□□ 0.01
Smc5Q8CG46 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC15.14■□□□□ 0.01
Smc5Q8CG46 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC15.14■□□□□ 0.01
Smc5Q8CG46 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Smc5Q8CG46 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smc5Q8CG46 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smc5Q8CG46 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smc5Q8CG46 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smc5Q8CG46 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smc5Q8CG46 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smc5Q8CG46 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smc5Q8CG46 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smc5Q8CG46 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smc5Q8CG46 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Smc5Q8CG46 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smc5Q8CG46 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Smc5Q8CG46 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smc5Q8CG46 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smc5Q8CG46 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smc5Q8CG46 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smc5Q8CG46 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smc5Q8CG46 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Smc5Q8CG46 Gm43773-201ENSMUST00000198548 2162 ntBASIC15.14■□□□□ 0.01
Smc5Q8CG46 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smc5Q8CG46 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smc5Q8CG46 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC15.13■□□□□ 0.01
Smc5Q8CG46 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smc5Q8CG46 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smc5Q8CG46 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC15.13■□□□□ 0.01
Smc5Q8CG46 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smc5Q8CG46 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smc5Q8CG46 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Smc5Q8CG46 Gm12201-201ENSMUST00000120657 1234 ntBASIC15.13■□□□□ 0.01
Smc5Q8CG46 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smc5Q8CG46 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smc5Q8CG46 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smc5Q8CG46 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Smc5Q8CG46 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Smc5Q8CG46 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smc5Q8CG46 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smc5Q8CG46 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smc5Q8CG46 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smc5Q8CG46 Gm13142-201ENSMUST00000117213 1453 ntBASIC15.13■□□□□ 0.01
Smc5Q8CG46 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smc5Q8CG46 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smc5Q8CG46 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Smc5Q8CG46 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smc5Q8CG46 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smc5Q8CG46 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC15.13■□□□□ 0.01
Smc5Q8CG46 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smc5Q8CG46 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smc5Q8CG46 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smc5Q8CG46 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smc5Q8CG46 Gm24934-201ENSMUST00000103764 111 ntBASIC15.12■□□□□ 0.01
Smc5Q8CG46 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC15.12■□□□□ 0.01
Smc5Q8CG46 Gm12390-201ENSMUST00000117897 397 ntBASIC15.12■□□□□ 0.01
Smc5Q8CG46 Gm13875-201ENSMUST00000120162 282 ntBASIC15.12■□□□□ 0.01
Smc5Q8CG46 Gm14247-201ENSMUST00000120950 237 ntBASIC15.12■□□□□ 0.01
Smc5Q8CG46 Gm14999-201ENSMUST00000121039 624 ntBASIC15.12■□□□□ 0.01
Smc5Q8CG46 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC15.12■□□□□ 0.01
Smc5Q8CG46 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC15.12■□□□□ 0.01
Smc5Q8CG46 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Smc5Q8CG46 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smc5Q8CG46 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Smc5Q8CG46 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Smc5Q8CG46 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Smc5Q8CG46 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Smc5Q8CG46 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smc5Q8CG46 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smc5Q8CG46 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smc5Q8CG46 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms