Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ccdc28bQ8CEG5 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ccdc28bQ8CEG5 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ccdc28bQ8CEG5 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ccdc28bQ8CEG5 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc28bQ8CEG5 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc28bQ8CEG5 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Ccdc28bQ8CEG5 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc28bQ8CEG5 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc28bQ8CEG5 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc28bQ8CEG5 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc28bQ8CEG5 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc28bQ8CEG5 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc28bQ8CEG5 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc28bQ8CEG5 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc28bQ8CEG5 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc28bQ8CEG5 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc28bQ8CEG5 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Ccdc28bQ8CEG5 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc28bQ8CEG5 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ccdc28bQ8CEG5 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.14□□□□□ -0.47
Ccdc28bQ8CEG5 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.14□□□□□ -0.47
Ccdc28bQ8CEG5 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.14□□□□□ -0.47
Ccdc28bQ8CEG5 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.14□□□□□ -0.47
Ccdc28bQ8CEG5 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc28bQ8CEG5 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.14□□□□□ -0.47
Ccdc28bQ8CEG5 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.14□□□□□ -0.47
Ccdc28bQ8CEG5 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.14□□□□□ -0.47
Ccdc28bQ8CEG5 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc28bQ8CEG5 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc28bQ8CEG5 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.14□□□□□ -0.47
Ccdc28bQ8CEG5 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc28bQ8CEG5 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc28bQ8CEG5 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc28bQ8CEG5 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.14□□□□□ -0.47
Ccdc28bQ8CEG5 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ccdc28bQ8CEG5 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.14□□□□□ -0.47
Ccdc28bQ8CEG5 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.14□□□□□ -0.47
Ccdc28bQ8CEG5 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Ccdc28bQ8CEG5 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc28bQ8CEG5 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc28bQ8CEG5 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc28bQ8CEG5 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc28bQ8CEG5 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc28bQ8CEG5 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.14□□□□□ -0.47
Ccdc28bQ8CEG5 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC12.14□□□□□ -0.47
Ccdc28bQ8CEG5 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc28bQ8CEG5 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ccdc28bQ8CEG5 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc28bQ8CEG5 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.13□□□□□ -0.47
Ccdc28bQ8CEG5 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc28bQ8CEG5 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc28bQ8CEG5 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc28bQ8CEG5 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc28bQ8CEG5 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc28bQ8CEG5 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc28bQ8CEG5 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc28bQ8CEG5 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc28bQ8CEG5 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc28bQ8CEG5 Gm12928-201ENSMUST00000117115 573 ntBASIC12.13□□□□□ -0.47
Ccdc28bQ8CEG5 Gm11637-201ENSMUST00000120601 592 ntBASIC12.13□□□□□ -0.47
Ccdc28bQ8CEG5 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc28bQ8CEG5 Gm16215-201ENSMUST00000161990 637 ntBASIC12.13□□□□□ -0.47
Ccdc28bQ8CEG5 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ccdc28bQ8CEG5 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.13□□□□□ -0.47
Ccdc28bQ8CEG5 Gm2495-201ENSMUST00000191160 466 ntBASIC12.13□□□□□ -0.47
Ccdc28bQ8CEG5 Gm37042-201ENSMUST00000193816 581 ntBASIC12.13□□□□□ -0.47
Ccdc28bQ8CEG5 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.13□□□□□ -0.47
Ccdc28bQ8CEG5 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc28bQ8CEG5 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc28bQ8CEG5 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ccdc28bQ8CEG5 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Ccdc28bQ8CEG5 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc28bQ8CEG5 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc28bQ8CEG5 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.13□□□□□ -0.47
Ccdc28bQ8CEG5 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc28bQ8CEG5 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc28bQ8CEG5 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc28bQ8CEG5 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc28bQ8CEG5 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc28bQ8CEG5 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc28bQ8CEG5 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc28bQ8CEG5 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc28bQ8CEG5 AC154314.2-201ENSMUST00000223677 3502 ntBASIC12.12□□□□□ -0.47
Ccdc28bQ8CEG5 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc28bQ8CEG5 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc28bQ8CEG5 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc28bQ8CEG5 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.12□□□□□ -0.47
Ccdc28bQ8CEG5 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc28bQ8CEG5 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc28bQ8CEG5 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc28bQ8CEG5 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc28bQ8CEG5 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms