Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ccdc17Q8CE13 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc17Q8CE13 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc17Q8CE13 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc17Q8CE13 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ccdc17Q8CE13 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.82□□□□□ -0.36
Ccdc17Q8CE13 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc17Q8CE13 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc17Q8CE13 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc17Q8CE13 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Ccdc17Q8CE13 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc17Q8CE13 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc17Q8CE13 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc17Q8CE13 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc17Q8CE13 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc17Q8CE13 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc17Q8CE13 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc17Q8CE13 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc17Q8CE13 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc17Q8CE13 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc17Q8CE13 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.81□□□□□ -0.36
Ccdc17Q8CE13 Gm15711-201ENSMUST00000118889 535 ntBASIC12.81□□□□□ -0.36
Ccdc17Q8CE13 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc17Q8CE13 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc17Q8CE13 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.81□□□□□ -0.36
Ccdc17Q8CE13 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.81□□□□□ -0.36
Ccdc17Q8CE13 Gm45598-202ENSMUST00000210719 986 ntBASIC12.81□□□□□ -0.36
Ccdc17Q8CE13 Gm7848-201ENSMUST00000210739 718 ntBASIC12.81□□□□□ -0.36
Ccdc17Q8CE13 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.81□□□□□ -0.36
Ccdc17Q8CE13 Gm39404-201ENSMUST00000216350 313 ntBASIC12.81□□□□□ -0.36
Ccdc17Q8CE13 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc17Q8CE13 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc17Q8CE13 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ccdc17Q8CE13 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc17Q8CE13 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Ccdc17Q8CE13 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc17Q8CE13 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ccdc17Q8CE13 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc17Q8CE13 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc17Q8CE13 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc17Q8CE13 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc17Q8CE13 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc17Q8CE13 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc17Q8CE13 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc17Q8CE13 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc17Q8CE13 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc17Q8CE13 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ccdc17Q8CE13 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc17Q8CE13 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.81□□□□□ -0.36
Ccdc17Q8CE13 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.81□□□□□ -0.36
Ccdc17Q8CE13 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc17Q8CE13 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Ccdc17Q8CE13 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc17Q8CE13 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Ccdc17Q8CE13 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc17Q8CE13 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc17Q8CE13 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc17Q8CE13 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc17Q8CE13 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc17Q8CE13 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc17Q8CE13 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc17Q8CE13 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc17Q8CE13 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc17Q8CE13 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc17Q8CE13 Gm15432-201ENSMUST00000121106 195 ntBASIC12.8□□□□□ -0.36
Ccdc17Q8CE13 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.8□□□□□ -0.36
Ccdc17Q8CE13 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.8□□□□□ -0.36
Ccdc17Q8CE13 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc17Q8CE13 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.8□□□□□ -0.36
Ccdc17Q8CE13 Gm37666-201ENSMUST00000194110 866 ntBASIC12.8□□□□□ -0.36
Ccdc17Q8CE13 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.8□□□□□ -0.36
Ccdc17Q8CE13 Gm5051-201ENSMUST00000204085 485 ntBASIC12.8□□□□□ -0.36
Ccdc17Q8CE13 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc17Q8CE13 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.8□□□□□ -0.36
Ccdc17Q8CE13 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc17Q8CE13 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc17Q8CE13 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc17Q8CE13 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc17Q8CE13 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc17Q8CE13 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc17Q8CE13 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc17Q8CE13 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc17Q8CE13 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc17Q8CE13 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc17Q8CE13 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc17Q8CE13 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.8□□□□□ -0.36
Ccdc17Q8CE13 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc17Q8CE13 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc17Q8CE13 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc17Q8CE13 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc17Q8CE13 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc17Q8CE13 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
Ccdc17Q8CE13 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc17Q8CE13 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc17Q8CE13 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc17Q8CE13 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc17Q8CE13 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc17Q8CE13 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc17Q8CE13 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc17Q8CE13 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms