Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc38Q8CDN8 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ccdc38Q8CDN8 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc38Q8CDN8 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc38Q8CDN8 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc38Q8CDN8 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc38Q8CDN8 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc38Q8CDN8 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ccdc38Q8CDN8 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.69□□□□□ -0.22
Ccdc38Q8CDN8 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc38Q8CDN8 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc38Q8CDN8 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc38Q8CDN8 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc38Q8CDN8 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc38Q8CDN8 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc38Q8CDN8 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc38Q8CDN8 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc38Q8CDN8 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.68□□□□□ -0.22
Ccdc38Q8CDN8 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc38Q8CDN8 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc38Q8CDN8 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc38Q8CDN8 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Ccdc38Q8CDN8 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.68□□□□□ -0.22
Ccdc38Q8CDN8 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc38Q8CDN8 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC13.68□□□□□ -0.22
Ccdc38Q8CDN8 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc38Q8CDN8 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc38Q8CDN8 Gm4034-201ENSMUST00000187674 480 ntBASIC13.68□□□□□ -0.22
Ccdc38Q8CDN8 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc38Q8CDN8 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc38Q8CDN8 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.68□□□□□ -0.22
Ccdc38Q8CDN8 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc38Q8CDN8 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc38Q8CDN8 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc38Q8CDN8 Gm10076-201ENSMUST00000073238 384 ntBASIC13.68□□□□□ -0.22
Ccdc38Q8CDN8 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc38Q8CDN8 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc38Q8CDN8 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc38Q8CDN8 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc38Q8CDN8 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc38Q8CDN8 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc38Q8CDN8 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc38Q8CDN8 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc38Q8CDN8 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc38Q8CDN8 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc38Q8CDN8 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc38Q8CDN8 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc38Q8CDN8 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc38Q8CDN8 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc38Q8CDN8 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc38Q8CDN8 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc38Q8CDN8 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc38Q8CDN8 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc38Q8CDN8 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc38Q8CDN8 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc38Q8CDN8 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc38Q8CDN8 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc38Q8CDN8 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc38Q8CDN8 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC13.67□□□□□ -0.22
Ccdc38Q8CDN8 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc38Q8CDN8 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc38Q8CDN8 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc38Q8CDN8 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc38Q8CDN8 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc38Q8CDN8 AC131586.1-201ENSMUST00000228844 2964 ntBASIC13.67□□□□□ -0.22
Ccdc38Q8CDN8 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc38Q8CDN8 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc38Q8CDN8 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc38Q8CDN8 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.67□□□□□ -0.22
Ccdc38Q8CDN8 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ccdc38Q8CDN8 Gm27514-201ENSMUST00000183692 110 ntBASIC13.67□□□□□ -0.22
Ccdc38Q8CDN8 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc38Q8CDN8 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.67□□□□□ -0.22
Ccdc38Q8CDN8 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.67□□□□□ -0.22
Ccdc38Q8CDN8 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc38Q8CDN8 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC13.67□□□□□ -0.22
Ccdc38Q8CDN8 Gm18165-201ENSMUST00000217426 928 ntBASIC13.67□□□□□ -0.22
Ccdc38Q8CDN8 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Ccdc38Q8CDN8 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc38Q8CDN8 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ccdc38Q8CDN8 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ccdc38Q8CDN8 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc38Q8CDN8 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ccdc38Q8CDN8 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.67□□□□□ -0.22
Ccdc38Q8CDN8 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc38Q8CDN8 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc38Q8CDN8 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc38Q8CDN8 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc38Q8CDN8 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc38Q8CDN8 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.67□□□□□ -0.22
Ccdc38Q8CDN8 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc38Q8CDN8 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc38Q8CDN8 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc38Q8CDN8 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc38Q8CDN8 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc38Q8CDN8 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc38Q8CDN8 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc38Q8CDN8 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc38Q8CDN8 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc38Q8CDN8 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 506.9 ms