Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc87Q8CDL9 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc87Q8CDL9 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc87Q8CDL9 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc87Q8CDL9 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Mir1938-201ENSMUST00000158746 100 ntBASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Gm17420-201ENSMUST00000164753 153 ntBASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Gm43630-201ENSMUST00000201550 776 ntBASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc87Q8CDL9 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc87Q8CDL9 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc87Q8CDL9 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc87Q8CDL9 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC13.02□□□□□ -0.32
Ccdc87Q8CDL9 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc87Q8CDL9 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc87Q8CDL9 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc87Q8CDL9 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc87Q8CDL9 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc87Q8CDL9 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Ccdc87Q8CDL9 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc87Q8CDL9 Gm37542-201ENSMUST00000192563 2832 ntBASIC13.02□□□□□ -0.33
Ccdc87Q8CDL9 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc87Q8CDL9 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.02□□□□□ -0.33
Ccdc87Q8CDL9 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc87Q8CDL9 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.02□□□□□ -0.33
Ccdc87Q8CDL9 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.02□□□□□ -0.33
Ccdc87Q8CDL9 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc87Q8CDL9 Rmrp-201ENSMUST00000157463 271 ntBASIC13.02□□□□□ -0.33
Ccdc87Q8CDL9 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ccdc87Q8CDL9 Gm26927-201ENSMUST00000182385 965 ntBASIC13.02□□□□□ -0.33
Ccdc87Q8CDL9 Mir6420-201ENSMUST00000185032 102 ntBASIC13.02□□□□□ -0.33
Ccdc87Q8CDL9 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc87Q8CDL9 Gm44882-201ENSMUST00000205702 802 ntBASIC13.02□□□□□ -0.33
Ccdc87Q8CDL9 Gm6007-201ENSMUST00000208170 823 ntBASIC13.02□□□□□ -0.33
Ccdc87Q8CDL9 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.02□□□□□ -0.33
Ccdc87Q8CDL9 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc87Q8CDL9 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc87Q8CDL9 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc87Q8CDL9 Gm24136-201ENSMUST00000083374 165 ntBASIC13.02□□□□□ -0.33
Ccdc87Q8CDL9 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc87Q8CDL9 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc87Q8CDL9 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ccdc87Q8CDL9 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc87Q8CDL9 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc87Q8CDL9 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.02□□□□□ -0.33
Ccdc87Q8CDL9 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Ccdc87Q8CDL9 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc87Q8CDL9 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC13.02□□□□□ -0.33
Ccdc87Q8CDL9 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Ccdc87Q8CDL9 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc87Q8CDL9 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc87Q8CDL9 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc87Q8CDL9 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc87Q8CDL9 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.02□□□□□ -0.33
Ccdc87Q8CDL9 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ccdc87Q8CDL9 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc87Q8CDL9 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ccdc87Q8CDL9 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms