Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lysmd4Q8CC84 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lysmd4Q8CC84 Gm15897-201ENSMUST00000117770 1486 ntBASIC11□□□□□ -0.65
Lysmd4Q8CC84 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
Lysmd4Q8CC84 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Lysmd4Q8CC84 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lysmd4Q8CC84 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lysmd4Q8CC84 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11□□□□□ -0.65
Lysmd4Q8CC84 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Lysmd4Q8CC84 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Lysmd4Q8CC84 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Lysmd4Q8CC84 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Lysmd4Q8CC84 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11□□□□□ -0.65
Lysmd4Q8CC84 Gm13315-201ENSMUST00000120376 991 ntBASIC11□□□□□ -0.65
Lysmd4Q8CC84 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lysmd4Q8CC84 Gm12091-201ENSMUST00000146791 830 ntBASIC11□□□□□ -0.65
Lysmd4Q8CC84 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lysmd4Q8CC84 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11□□□□□ -0.65
Lysmd4Q8CC84 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11□□□□□ -0.65
Lysmd4Q8CC84 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11□□□□□ -0.65
Lysmd4Q8CC84 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11□□□□□ -0.65
Lysmd4Q8CC84 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Lysmd4Q8CC84 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11□□□□□ -0.65
Lysmd4Q8CC84 AC162801.1-201ENSMUST00000220612 198 ntBASIC11□□□□□ -0.65
Lysmd4Q8CC84 Gm19163-201ENSMUST00000223313 780 ntBASIC11□□□□□ -0.65
Lysmd4Q8CC84 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11□□□□□ -0.65
Lysmd4Q8CC84 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11□□□□□ -0.65
Lysmd4Q8CC84 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11□□□□□ -0.65
Lysmd4Q8CC84 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lysmd4Q8CC84 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Lysmd4Q8CC84 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lysmd4Q8CC84 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Lysmd4Q8CC84 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11□□□□□ -0.65
Lysmd4Q8CC84 Gm9816-201ENSMUST00000122292 1414 ntBASIC11□□□□□ -0.65
Lysmd4Q8CC84 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Lysmd4Q8CC84 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lysmd4Q8CC84 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Gm8228-201ENSMUST00000189949 2192 ntBASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Gm6473-201ENSMUST00000188572 1210 ntBASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 AC150560.1-201ENSMUST00000227731 1187 ntBASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Lysmd4Q8CC84 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms