Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.08□□□□□ -0.64
Col6a6Q8C6K9 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Col6a6Q8C6K9 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a6Q8C6K9 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a6Q8C6K9 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a6Q8C6K9 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.08□□□□□ -0.64
Col6a6Q8C6K9 Gm5419-201ENSMUST00000119301 527 ntBASIC11.08□□□□□ -0.64
Col6a6Q8C6K9 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.08□□□□□ -0.64
Col6a6Q8C6K9 Gm4879-201ENSMUST00000122190 1272 ntBASIC11.08□□□□□ -0.64
Col6a6Q8C6K9 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a6Q8C6K9 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a6Q8C6K9 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.08□□□□□ -0.64
Col6a6Q8C6K9 Gm44329-201ENSMUST00000197469 112 ntBASIC11.08□□□□□ -0.64
Col6a6Q8C6K9 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Col6a6Q8C6K9 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a6Q8C6K9 Gm44980-201ENSMUST00000205826 314 ntBASIC11.08□□□□□ -0.64
Col6a6Q8C6K9 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC11.08□□□□□ -0.64
Col6a6Q8C6K9 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Col6a6Q8C6K9 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Col6a6Q8C6K9 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.08□□□□□ -0.64
Col6a6Q8C6K9 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a6Q8C6K9 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a6Q8C6K9 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a6Q8C6K9 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.08□□□□□ -0.64
Col6a6Q8C6K9 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a6Q8C6K9 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a6Q8C6K9 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a6Q8C6K9 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a6Q8C6K9 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.08□□□□□ -0.64
Col6a6Q8C6K9 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a6Q8C6K9 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Col6a6Q8C6K9 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.08□□□□□ -0.64
Col6a6Q8C6K9 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 Gm12816-201ENSMUST00000118069 1212 ntBASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 Gm23596-201ENSMUST00000104304 132 ntBASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 Gm22711-201ENSMUST00000116890 133 ntBASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 Mir8115-201ENSMUST00000184992 119 ntBASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 Gm8325-201ENSMUST00000099086 453 ntBASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.07□□□□□ -0.64
Col6a6Q8C6K9 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col6a6Q8C6K9 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col6a6Q8C6K9 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Col6a6Q8C6K9 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
Col6a6Q8C6K9 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Col6a6Q8C6K9 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Col6a6Q8C6K9 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC11.06□□□□□ -0.64
Col6a6Q8C6K9 Gm15352-201ENSMUST00000118696 270 ntBASIC11.06□□□□□ -0.64
Col6a6Q8C6K9 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col6a6Q8C6K9 Gm11980-201ENSMUST00000121445 986 ntBASIC11.06□□□□□ -0.64
Col6a6Q8C6K9 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.06□□□□□ -0.64
Col6a6Q8C6K9 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.06□□□□□ -0.64
Col6a6Q8C6K9 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col6a6Q8C6K9 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Col6a6Q8C6K9 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col6a6Q8C6K9 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC11.06□□□□□ -0.64
Col6a6Q8C6K9 Gm9132-201ENSMUST00000210182 832 ntBASIC11.06□□□□□ -0.64
Col6a6Q8C6K9 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.06□□□□□ -0.64
Col6a6Q8C6K9 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC11.06□□□□□ -0.64
Col6a6Q8C6K9 AC154176.1-201ENSMUST00000225897 220 ntBASIC11.06□□□□□ -0.64
Col6a6Q8C6K9 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms