Protein–RNA interactions for Protein: Q8C3X2

Ccdc90b, Coiled-coil domain-containing protein 90B, mitochondrial, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc90bQ8C3X2 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc90bQ8C3X2 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc90bQ8C3X2 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc90bQ8C3X2 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc90bQ8C3X2 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc90bQ8C3X2 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.86□□□□□ -0.51
Ccdc90bQ8C3X2 Gm13123-201ENSMUST00000122173 492 ntBASIC11.86□□□□□ -0.51
Ccdc90bQ8C3X2 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc90bQ8C3X2 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.86□□□□□ -0.51
Ccdc90bQ8C3X2 Gm26185-201ENSMUST00000157692 266 ntBASIC11.86□□□□□ -0.51
Ccdc90bQ8C3X2 Gm22121-201ENSMUST00000175148 54 ntBASIC11.86□□□□□ -0.51
Ccdc90bQ8C3X2 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc90bQ8C3X2 Gm37935-201ENSMUST00000192012 982 ntBASIC11.86□□□□□ -0.51
Ccdc90bQ8C3X2 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc90bQ8C3X2 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.86□□□□□ -0.51
Ccdc90bQ8C3X2 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc90bQ8C3X2 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc90bQ8C3X2 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.86□□□□□ -0.51
Ccdc90bQ8C3X2 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc90bQ8C3X2 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.86□□□□□ -0.51
Ccdc90bQ8C3X2 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc90bQ8C3X2 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc90bQ8C3X2 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc90bQ8C3X2 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc90bQ8C3X2 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc90bQ8C3X2 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc90bQ8C3X2 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc90bQ8C3X2 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc90bQ8C3X2 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.85□□□□□ -0.51
Ccdc90bQ8C3X2 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc90bQ8C3X2 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc90bQ8C3X2 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ccdc90bQ8C3X2 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.85□□□□□ -0.51
Ccdc90bQ8C3X2 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc90bQ8C3X2 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Ccdc90bQ8C3X2 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ccdc90bQ8C3X2 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc90bQ8C3X2 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc90bQ8C3X2 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Ccdc90bQ8C3X2 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc90bQ8C3X2 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc90bQ8C3X2 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc90bQ8C3X2 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC11.85□□□□□ -0.51
Ccdc90bQ8C3X2 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.85□□□□□ -0.51
Ccdc90bQ8C3X2 Rmrp-201ENSMUST00000157463 271 ntBASIC11.85□□□□□ -0.51
Ccdc90bQ8C3X2 Gm16296-201ENSMUST00000159905 325 ntBASIC11.85□□□□□ -0.51
Ccdc90bQ8C3X2 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc90bQ8C3X2 Gm28631-201ENSMUST00000190740 334 ntBASIC11.85□□□□□ -0.51
Ccdc90bQ8C3X2 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ccdc90bQ8C3X2 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.85□□□□□ -0.51
Ccdc90bQ8C3X2 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.85□□□□□ -0.51
Ccdc90bQ8C3X2 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.85□□□□□ -0.51
Ccdc90bQ8C3X2 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.85□□□□□ -0.51
Ccdc90bQ8C3X2 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc90bQ8C3X2 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc90bQ8C3X2 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC11.85□□□□□ -0.51
Ccdc90bQ8C3X2 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.85□□□□□ -0.51
Ccdc90bQ8C3X2 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc90bQ8C3X2 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ccdc90bQ8C3X2 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc90bQ8C3X2 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc90bQ8C3X2 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.85□□□□□ -0.51
Ccdc90bQ8C3X2 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc90bQ8C3X2 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc90bQ8C3X2 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc90bQ8C3X2 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc90bQ8C3X2 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc90bQ8C3X2 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.85□□□□□ -0.51
Ccdc90bQ8C3X2 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc90bQ8C3X2 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc90bQ8C3X2 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc90bQ8C3X2 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc90bQ8C3X2 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Ccdc90bQ8C3X2 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc90bQ8C3X2 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.84□□□□□ -0.51
Ccdc90bQ8C3X2 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc90bQ8C3X2 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc90bQ8C3X2 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc90bQ8C3X2 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc90bQ8C3X2 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc90bQ8C3X2 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc90bQ8C3X2 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc90bQ8C3X2 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc90bQ8C3X2 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc90bQ8C3X2 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc90bQ8C3X2 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc90bQ8C3X2 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc90bQ8C3X2 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC11.84□□□□□ -0.51
Ccdc90bQ8C3X2 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Ccdc90bQ8C3X2 Gm16215-201ENSMUST00000161990 637 ntBASIC11.84□□□□□ -0.51
Ccdc90bQ8C3X2 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc90bQ8C3X2 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.84□□□□□ -0.51
Ccdc90bQ8C3X2 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc90bQ8C3X2 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc90bQ8C3X2 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Ccdc90bQ8C3X2 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Ccdc90bQ8C3X2 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc90bQ8C3X2 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc90bQ8C3X2 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc90bQ8C3X2 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms