Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 Gm27501-201ENSMUST00000183599 107 ntBASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 Gm27516-201ENSMUST00000184237 98 ntBASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 Gm29396-201ENSMUST00000185659 716 ntBASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 Gm5950-201ENSMUST00000213337 772 ntBASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 Gm8227-201ENSMUST00000223306 571 ntBASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.8□□□□□ -0.36
Sh3rf3Q8C120 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf3Q8C120 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf3Q8C120 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Sh3rf3Q8C120 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf3Q8C120 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.8□□□□□ -0.36
Sh3rf3Q8C120 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Sh3rf3Q8C120 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Sh3rf3Q8C120 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf3Q8C120 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf3Q8C120 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf3Q8C120 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf3Q8C120 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.8□□□□□ -0.36
Sh3rf3Q8C120 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf3Q8C120 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf3Q8C120 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf3Q8C120 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf3Q8C120 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Sh3rf3Q8C120 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf3Q8C120 Gm13570-201ENSMUST00000140763 309 ntBASIC12.8□□□□□ -0.36
Sh3rf3Q8C120 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.8□□□□□ -0.36
Sh3rf3Q8C120 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.8□□□□□ -0.36
Sh3rf3Q8C120 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.8□□□□□ -0.36
Sh3rf3Q8C120 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.8□□□□□ -0.36
Sh3rf3Q8C120 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Sh3rf3Q8C120 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.8□□□□□ -0.36
Sh3rf3Q8C120 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.8□□□□□ -0.36
Sh3rf3Q8C120 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.8□□□□□ -0.36
Sh3rf3Q8C120 Gm7046-201ENSMUST00000221351 977 ntBASIC12.8□□□□□ -0.36
Sh3rf3Q8C120 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf3Q8C120 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf3Q8C120 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf3Q8C120 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.8□□□□□ -0.36
Sh3rf3Q8C120 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf3Q8C120 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf3Q8C120 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf3Q8C120 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf3Q8C120 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.8□□□□□ -0.36
Sh3rf3Q8C120 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf3Q8C120 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf3Q8C120 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.8□□□□□ -0.36
Sh3rf3Q8C120 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf3Q8C120 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sh3rf3Q8C120 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh3rf3Q8C120 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sh3rf3Q8C120 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh3rf3Q8C120 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.79□□□□□ -0.36
Sh3rf3Q8C120 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Sh3rf3Q8C120 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.79□□□□□ -0.36
Sh3rf3Q8C120 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh3rf3Q8C120 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh3rf3Q8C120 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Sh3rf3Q8C120 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.79□□□□□ -0.36
Sh3rf3Q8C120 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh3rf3Q8C120 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Sh3rf3Q8C120 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh3rf3Q8C120 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh3rf3Q8C120 Gm10434-201ENSMUST00000101158 471 ntBASIC12.79□□□□□ -0.36
Sh3rf3Q8C120 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh3rf3Q8C120 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh3rf3Q8C120 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Sh3rf3Q8C120 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.79□□□□□ -0.36
Sh3rf3Q8C120 Gm6334-201ENSMUST00000207083 228 ntBASIC12.79□□□□□ -0.36
Sh3rf3Q8C120 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.79□□□□□ -0.36
Sh3rf3Q8C120 Morn2-202ENSMUST00000227729 656 ntBASIC12.79□□□□□ -0.36
Sh3rf3Q8C120 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh3rf3Q8C120 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Sh3rf3Q8C120 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sh3rf3Q8C120 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh3rf3Q8C120 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sh3rf3Q8C120 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh3rf3Q8C120 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms