Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm24990-201ENSMUST00000157406 323 ntBASIC13.64□□□□□ -0.23
Trim47Q8C0E3 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trim47Q8C0E3 Gm5244-202ENSMUST00000189517 743 ntBASIC13.64□□□□□ -0.23
Trim47Q8C0E3 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim47Q8C0E3 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trim47Q8C0E3 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim47Q8C0E3 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trim47Q8C0E3 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim47Q8C0E3 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.64□□□□□ -0.23
Trim47Q8C0E3 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim47Q8C0E3 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim47Q8C0E3 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.64□□□□□ -0.23
Trim47Q8C0E3 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.64□□□□□ -0.23
Trim47Q8C0E3 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim47Q8C0E3 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim47Q8C0E3 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.63□□□□□ -0.23
Trim47Q8C0E3 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim47Q8C0E3 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim47Q8C0E3 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim47Q8C0E3 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim47Q8C0E3 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim47Q8C0E3 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim47Q8C0E3 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim47Q8C0E3 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim47Q8C0E3 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim47Q8C0E3 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trim47Q8C0E3 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim47Q8C0E3 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC13.63□□□□□ -0.23
Trim47Q8C0E3 Gstp-ps-201ENSMUST00000195526 631 ntBASIC13.63□□□□□ -0.23
Trim47Q8C0E3 Gm37466-201ENSMUST00000195692 652 ntBASIC13.63□□□□□ -0.23
Trim47Q8C0E3 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trim47Q8C0E3 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.63□□□□□ -0.23
Trim47Q8C0E3 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC13.63□□□□□ -0.23
Trim47Q8C0E3 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC13.63□□□□□ -0.23
Trim47Q8C0E3 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.63□□□□□ -0.23
Trim47Q8C0E3 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.63□□□□□ -0.23
Trim47Q8C0E3 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC13.63□□□□□ -0.23
Trim47Q8C0E3 AC106830.1-201ENSMUST00000228032 1003 ntBASIC13.63□□□□□ -0.23
Trim47Q8C0E3 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim47Q8C0E3 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trim47Q8C0E3 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trim47Q8C0E3 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim47Q8C0E3 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Trim47Q8C0E3 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim47Q8C0E3 Gm9361-201ENSMUST00000198695 1507 ntBASIC13.63□□□□□ -0.23
Trim47Q8C0E3 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.63□□□□□ -0.23
Trim47Q8C0E3 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.63□□□□□ -0.23
Trim47Q8C0E3 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trim47Q8C0E3 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim47Q8C0E3 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim47Q8C0E3 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Trim47Q8C0E3 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim47Q8C0E3 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trim47Q8C0E3 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim47Q8C0E3 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim47Q8C0E3 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim47Q8C0E3 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim47Q8C0E3 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim47Q8C0E3 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim47Q8C0E3 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim47Q8C0E3 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim47Q8C0E3 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.62□□□□□ -0.23
Trim47Q8C0E3 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim47Q8C0E3 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim47Q8C0E3 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim47Q8C0E3 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim47Q8C0E3 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim47Q8C0E3 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC13.62□□□□□ -0.23
Trim47Q8C0E3 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim47Q8C0E3 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trim47Q8C0E3 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim47Q8C0E3 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim47Q8C0E3 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim47Q8C0E3 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim47Q8C0E3 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim47Q8C0E3 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim47Q8C0E3 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim47Q8C0E3 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim47Q8C0E3 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Trim47Q8C0E3 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim47Q8C0E3 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC13.62□□□□□ -0.23
Trim47Q8C0E3 Gm11989-201ENSMUST00000117240 672 ntBASIC13.62□□□□□ -0.23
Trim47Q8C0E3 Gm11362-201ENSMUST00000118838 850 ntBASIC13.62□□□□□ -0.23
Trim47Q8C0E3 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim47Q8C0E3 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim47Q8C0E3 Gm27341-201ENSMUST00000183570 106 ntBASIC13.62□□□□□ -0.23
Trim47Q8C0E3 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim47Q8C0E3 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim47Q8C0E3 Gm18212-201ENSMUST00000211678 889 ntBASIC13.62□□□□□ -0.23
Trim47Q8C0E3 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim47Q8C0E3 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC13.62□□□□□ -0.23
Trim47Q8C0E3 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim47Q8C0E3 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim47Q8C0E3 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim47Q8C0E3 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trim47Q8C0E3 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim47Q8C0E3 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim47Q8C0E3 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trim47Q8C0E3 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim47Q8C0E3 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms