Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup54Q8BTS4 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.56□□□□□ -0.4
Nup54Q8BTS4 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup54Q8BTS4 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nup54Q8BTS4 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.56□□□□□ -0.4
Nup54Q8BTS4 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.56□□□□□ -0.4
Nup54Q8BTS4 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Nup54Q8BTS4 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup54Q8BTS4 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup54Q8BTS4 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Nup54Q8BTS4 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup54Q8BTS4 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Nup54Q8BTS4 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nup54Q8BTS4 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup54Q8BTS4 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.56□□□□□ -0.4
Nup54Q8BTS4 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nup54Q8BTS4 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nup54Q8BTS4 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.56□□□□□ -0.4
Nup54Q8BTS4 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup54Q8BTS4 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Nup54Q8BTS4 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup54Q8BTS4 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.56□□□□□ -0.4
Nup54Q8BTS4 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup54Q8BTS4 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Nup54Q8BTS4 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup54Q8BTS4 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup54Q8BTS4 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Nup54Q8BTS4 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup54Q8BTS4 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup54Q8BTS4 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup54Q8BTS4 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup54Q8BTS4 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup54Q8BTS4 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup54Q8BTS4 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nup54Q8BTS4 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup54Q8BTS4 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.56□□□□□ -0.4
Nup54Q8BTS4 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nup54Q8BTS4 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup54Q8BTS4 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nup54Q8BTS4 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nup54Q8BTS4 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup54Q8BTS4 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup54Q8BTS4 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup54Q8BTS4 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup54Q8BTS4 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.55□□□□□ -0.4
Nup54Q8BTS4 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nup54Q8BTS4 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup54Q8BTS4 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nup54Q8BTS4 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nup54Q8BTS4 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.55□□□□□ -0.4
Nup54Q8BTS4 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Nup54Q8BTS4 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Nup54Q8BTS4 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.55□□□□□ -0.4
Nup54Q8BTS4 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.55□□□□□ -0.4
Nup54Q8BTS4 Gm8913-201ENSMUST00000209491 641 ntBASIC12.55□□□□□ -0.4
Nup54Q8BTS4 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.55□□□□□ -0.4
Nup54Q8BTS4 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.55□□□□□ -0.4
Nup54Q8BTS4 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.55□□□□□ -0.4
Nup54Q8BTS4 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Nup54Q8BTS4 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Nup54Q8BTS4 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup54Q8BTS4 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup54Q8BTS4 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nup54Q8BTS4 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup54Q8BTS4 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup54Q8BTS4 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.55□□□□□ -0.4
Nup54Q8BTS4 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup54Q8BTS4 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Nup54Q8BTS4 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Nup54Q8BTS4 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.55□□□□□ -0.4
Nup54Q8BTS4 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nup54Q8BTS4 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup54Q8BTS4 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nup54Q8BTS4 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nup54Q8BTS4 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup54Q8BTS4 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nup54Q8BTS4 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nup54Q8BTS4 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.54□□□□□ -0.4
Nup54Q8BTS4 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.54□□□□□ -0.4
Nup54Q8BTS4 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Nup54Q8BTS4 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup54Q8BTS4 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup54Q8BTS4 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Nup54Q8BTS4 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Nup54Q8BTS4 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nup54Q8BTS4 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms