Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Tns3-201ENSMUST00000020695 7483 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Smco3Q8BQM7 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Gm21854-201ENSMUST00000179901 471 ntBASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Gm27390-201ENSMUST00000184516 176 ntBASIC10.11□□□□□ -0.79
Smco3Q8BQM7 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Gm43514-201ENSMUST00000198852 424 ntBASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Gm16372-201ENSMUST00000073088 450 ntBASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smco3Q8BQM7 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smco3Q8BQM7 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Atg16l2-201ENSMUST00000120267 6459 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smco3Q8BQM7 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Smco3Q8BQM7 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Smco3Q8BQM7 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Smco3Q8BQM7 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
Smco3Q8BQM7 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC10.1□□□□□ -0.79
Smco3Q8BQM7 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Smco3Q8BQM7 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Smco3Q8BQM7 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Smco3Q8BQM7 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
Smco3Q8BQM7 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Smco3Q8BQM7 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Smco3Q8BQM7 Myo18a-201ENSMUST00000000645 7307 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Smco3Q8BQM7 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Smco3Q8BQM7 Olfr1219-204ENSMUST00000215225 5865 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Smco3Q8BQM7 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC10.1□□□□□ -0.79
Smco3Q8BQM7 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Smco3Q8BQM7 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Smco3Q8BQM7 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Smco3Q8BQM7 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC10.1□□□□□ -0.79
Smco3Q8BQM7 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC10.1□□□□□ -0.79
Smco3Q8BQM7 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC10.1□□□□□ -0.79
Smco3Q8BQM7 Gm6736-201ENSMUST00000166583 948 ntBASIC10.1□□□□□ -0.79
Smco3Q8BQM7 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Smco3Q8BQM7 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Smco3Q8BQM7 Gm7063-201ENSMUST00000186840 981 ntBASIC10.1□□□□□ -0.79
Smco3Q8BQM7 Gm35960-201ENSMUST00000202712 767 ntBASIC10.1□□□□□ -0.79
Smco3Q8BQM7 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC10.1□□□□□ -0.79
Smco3Q8BQM7 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Smco3Q8BQM7 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Smco3Q8BQM7 Mir339-201ENSMUST00000083659 96 ntBASIC10.1□□□□□ -0.79
Smco3Q8BQM7 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.1□□□□□ -0.79
Smco3Q8BQM7 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Smco3Q8BQM7 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Smco3Q8BQM7 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Smco3Q8BQM7 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
Smco3Q8BQM7 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Smco3Q8BQM7 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Smco3Q8BQM7 BC043934-202ENSMUST00000185694 2356 ntBASIC10.1□□□□□ -0.79
Smco3Q8BQM7 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Smco3Q8BQM7 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Smco3Q8BQM7 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Smco3Q8BQM7 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Smco3Q8BQM7 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Smco3Q8BQM7 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Smco3Q8BQM7 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Smco3Q8BQM7 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms