Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sfr1Q8BP27 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sfr1Q8BP27 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sfr1Q8BP27 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sfr1Q8BP27 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sfr1Q8BP27 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sfr1Q8BP27 Gm14999-201ENSMUST00000121039 624 ntBASIC12.58□□□□□ -0.4
Sfr1Q8BP27 Gm14760-201ENSMUST00000121831 999 ntBASIC12.58□□□□□ -0.4
Sfr1Q8BP27 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sfr1Q8BP27 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Sfr1Q8BP27 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Sfr1Q8BP27 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.58□□□□□ -0.4
Sfr1Q8BP27 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sfr1Q8BP27 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sfr1Q8BP27 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sfr1Q8BP27 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sfr1Q8BP27 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.58□□□□□ -0.4
Sfr1Q8BP27 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sfr1Q8BP27 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Sfr1Q8BP27 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sfr1Q8BP27 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sfr1Q8BP27 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sfr1Q8BP27 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Sfr1Q8BP27 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sfr1Q8BP27 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sfr1Q8BP27 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sfr1Q8BP27 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sfr1Q8BP27 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sfr1Q8BP27 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Sfr1Q8BP27 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Sfr1Q8BP27 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.58□□□□□ -0.4
Sfr1Q8BP27 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.58□□□□□ -0.4
Sfr1Q8BP27 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sfr1Q8BP27 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Sfr1Q8BP27 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sfr1Q8BP27 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sfr1Q8BP27 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.57□□□□□ -0.4
Sfr1Q8BP27 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.57□□□□□ -0.4
Sfr1Q8BP27 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sfr1Q8BP27 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sfr1Q8BP27 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sfr1Q8BP27 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sfr1Q8BP27 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.57□□□□□ -0.4
Sfr1Q8BP27 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.57□□□□□ -0.4
Sfr1Q8BP27 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sfr1Q8BP27 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Sfr1Q8BP27 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sfr1Q8BP27 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.57□□□□□ -0.4
Sfr1Q8BP27 Gm11531-201ENSMUST00000117614 555 ntBASIC12.57□□□□□ -0.4
Sfr1Q8BP27 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sfr1Q8BP27 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.57□□□□□ -0.4
Sfr1Q8BP27 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sfr1Q8BP27 Gm25043-201ENSMUST00000158604 212 ntBASIC12.57□□□□□ -0.4
Sfr1Q8BP27 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sfr1Q8BP27 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sfr1Q8BP27 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.57□□□□□ -0.4
Sfr1Q8BP27 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.57□□□□□ -0.4
Sfr1Q8BP27 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sfr1Q8BP27 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sfr1Q8BP27 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.57□□□□□ -0.4
Sfr1Q8BP27 Gm30285-201ENSMUST00000214614 422 ntBASIC12.57□□□□□ -0.4
Sfr1Q8BP27 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sfr1Q8BP27 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.57□□□□□ -0.4
Sfr1Q8BP27 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sfr1Q8BP27 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Sfr1Q8BP27 Gm43375-201ENSMUST00000196705 2480 ntBASIC12.57□□□□□ -0.4
Sfr1Q8BP27 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.57□□□□□ -0.4
Sfr1Q8BP27 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sfr1Q8BP27 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sfr1Q8BP27 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Sfr1Q8BP27 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sfr1Q8BP27 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.57□□□□□ -0.4
Sfr1Q8BP27 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sfr1Q8BP27 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sfr1Q8BP27 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sfr1Q8BP27 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sfr1Q8BP27 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sfr1Q8BP27 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sfr1Q8BP27 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sfr1Q8BP27 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Gm14726-201ENSMUST00000120623 896 ntBASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Gm13570-201ENSMUST00000140763 309 ntBASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Gm9022-201ENSMUST00000182482 992 ntBASIC12.56□□□□□ -0.4
Sfr1Q8BP27 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms