Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 Gm26927-201ENSMUST00000182385 965 ntBASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 Gm45059-201ENSMUST00000205558 1077 ntBASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 AC153974.2-201ENSMUST00000218577 1025 ntBASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 Gm45342-201ENSMUST00000210903 1363 ntBASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdhr3Q8BL00 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cdhr3Q8BL00 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdhr3Q8BL00 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdhr3Q8BL00 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cdhr3Q8BL00 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Cdhr3Q8BL00 Gm15806-201ENSMUST00000120696 955 ntBASIC10.71□□□□□ -0.69
Cdhr3Q8BL00 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC10.71□□□□□ -0.69
Cdhr3Q8BL00 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
Cdhr3Q8BL00 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC10.71□□□□□ -0.69
Cdhr3Q8BL00 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC10.71□□□□□ -0.69
Cdhr3Q8BL00 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cdhr3Q8BL00 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdhr3Q8BL00 Ighv5-13-201ENSMUST00000193550 290 ntBASIC10.71□□□□□ -0.69
Cdhr3Q8BL00 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.71□□□□□ -0.69
Cdhr3Q8BL00 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
Cdhr3Q8BL00 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC10.71□□□□□ -0.69
Cdhr3Q8BL00 Gm7561-201ENSMUST00000211203 886 ntBASIC10.71□□□□□ -0.69
Cdhr3Q8BL00 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cdhr3Q8BL00 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdhr3Q8BL00 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cdhr3Q8BL00 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cdhr3Q8BL00 Gm7537-201ENSMUST00000221660 1414 ntBASIC10.71□□□□□ -0.69
Cdhr3Q8BL00 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdhr3Q8BL00 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdhr3Q8BL00 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdhr3Q8BL00 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdhr3Q8BL00 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdhr3Q8BL00 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Cdhr3Q8BL00 Gm22058-201ENSMUST00000083393 310 ntBASIC10.71□□□□□ -0.69
Cdhr3Q8BL00 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdhr3Q8BL00 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Cdhr3Q8BL00 Gm6091-201ENSMUST00000098307 165 ntBASIC10.71□□□□□ -0.69
Cdhr3Q8BL00 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Cdhr3Q8BL00 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Cdhr3Q8BL00 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cdhr3Q8BL00 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cdhr3Q8BL00 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cdhr3Q8BL00 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cdhr3Q8BL00 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cdhr3Q8BL00 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.71□□□□□ -0.7
Cdhr3Q8BL00 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cdhr3Q8BL00 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cdhr3Q8BL00 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.71□□□□□ -0.7
Cdhr3Q8BL00 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cdhr3Q8BL00 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cdhr3Q8BL00 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Cdhr3Q8BL00 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdhr3Q8BL00 Gm43172-201ENSMUST00000202139 2137 ntBASIC10.7□□□□□ -0.7
Cdhr3Q8BL00 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdhr3Q8BL00 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC10.7□□□□□ -0.7
Cdhr3Q8BL00 Gm42913-201ENSMUST00000197936 1853 ntBASIC10.7□□□□□ -0.7
Cdhr3Q8BL00 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdhr3Q8BL00 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdhr3Q8BL00 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdhr3Q8BL00 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.7□□□□□ -0.7
Cdhr3Q8BL00 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Cdhr3Q8BL00 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cdhr3Q8BL00 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdhr3Q8BL00 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Cdhr3Q8BL00 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Cdhr3Q8BL00 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdhr3Q8BL00 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdhr3Q8BL00 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdhr3Q8BL00 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdhr3Q8BL00 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdhr3Q8BL00 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cdhr3Q8BL00 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC10.7□□□□□ -0.7
Cdhr3Q8BL00 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC10.7□□□□□ -0.7
Cdhr3Q8BL00 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cdhr3Q8BL00 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.7□□□□□ -0.7
Cdhr3Q8BL00 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms