Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc40Q8BI79 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.89□□□□□ -0.35
Ccdc40Q8BI79 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc40Q8BI79 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc40Q8BI79 Gm45784-201ENSMUST00000188360 142 ntBASIC12.89□□□□□ -0.35
Ccdc40Q8BI79 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc40Q8BI79 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.89□□□□□ -0.35
Ccdc40Q8BI79 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.89□□□□□ -0.35
Ccdc40Q8BI79 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.89□□□□□ -0.35
Ccdc40Q8BI79 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc40Q8BI79 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc40Q8BI79 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc40Q8BI79 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Ccdc40Q8BI79 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc40Q8BI79 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.89□□□□□ -0.35
Ccdc40Q8BI79 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Ccdc40Q8BI79 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc40Q8BI79 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Ccdc40Q8BI79 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.89□□□□□ -0.35
Ccdc40Q8BI79 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc40Q8BI79 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.89□□□□□ -0.35
Ccdc40Q8BI79 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc40Q8BI79 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc40Q8BI79 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Ccdc40Q8BI79 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc40Q8BI79 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc40Q8BI79 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc40Q8BI79 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc40Q8BI79 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.89□□□□□ -0.35
Ccdc40Q8BI79 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc40Q8BI79 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Ccdc40Q8BI79 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc40Q8BI79 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 Gm15824-201ENSMUST00000119516 955 ntBASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ccdc40Q8BI79 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc40Q8BI79 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc40Q8BI79 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.87□□□□□ -0.35
Ccdc40Q8BI79 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.87□□□□□ -0.35
Ccdc40Q8BI79 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc40Q8BI79 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Ccdc40Q8BI79 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc40Q8BI79 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Ccdc40Q8BI79 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Ccdc40Q8BI79 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.87□□□□□ -0.35
Ccdc40Q8BI79 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc40Q8BI79 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc40Q8BI79 Gm13226-201ENSMUST00000117838 404 ntBASIC12.87□□□□□ -0.35
Ccdc40Q8BI79 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.87□□□□□ -0.35
Ccdc40Q8BI79 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc40Q8BI79 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc40Q8BI79 Gm18584-201ENSMUST00000203098 964 ntBASIC12.87□□□□□ -0.35
Ccdc40Q8BI79 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.87□□□□□ -0.35
Ccdc40Q8BI79 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.87□□□□□ -0.35
Ccdc40Q8BI79 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.87□□□□□ -0.35
Ccdc40Q8BI79 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms