Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 Gm5187-201ENSMUST00000117317 991 ntBASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 Gm11964-201ENSMUST00000120982 444 ntBASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 Gm42627-201ENSMUST00000197347 224 ntBASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Clrn3Q8BHH8 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Clrn3Q8BHH8 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Clrn3Q8BHH8 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
Clrn3Q8BHH8 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 Gm22058-201ENSMUST00000083393 310 ntBASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms