Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim50Q810I2 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim50Q810I2 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim50Q810I2 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim50Q810I2 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim50Q810I2 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim50Q810I2 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim50Q810I2 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim50Q810I2 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim50Q810I2 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim50Q810I2 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Trim50Q810I2 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim50Q810I2 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.97□□□□□ -0.49
Trim50Q810I2 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.97□□□□□ -0.49
Trim50Q810I2 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim50Q810I2 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim50Q810I2 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim50Q810I2 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim50Q810I2 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim50Q810I2 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim50Q810I2 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim50Q810I2 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trim50Q810I2 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.97□□□□□ -0.49
Trim50Q810I2 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim50Q810I2 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim50Q810I2 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.97□□□□□ -0.49
Trim50Q810I2 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.97□□□□□ -0.49
Trim50Q810I2 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.97□□□□□ -0.49
Trim50Q810I2 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim50Q810I2 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim50Q810I2 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim50Q810I2 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim50Q810I2 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trim50Q810I2 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim50Q810I2 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim50Q810I2 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim50Q810I2 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim50Q810I2 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim50Q810I2 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim50Q810I2 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim50Q810I2 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim50Q810I2 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim50Q810I2 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim50Q810I2 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Trim50Q810I2 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.96□□□□□ -0.49
Trim50Q810I2 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trim50Q810I2 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.96□□□□□ -0.49
Trim50Q810I2 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.96□□□□□ -0.49
Trim50Q810I2 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.96□□□□□ -0.49
Trim50Q810I2 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.96□□□□□ -0.49
Trim50Q810I2 Gm27516-201ENSMUST00000184237 98 ntBASIC11.96□□□□□ -0.49
Trim50Q810I2 Mir8109-201ENSMUST00000184375 117 ntBASIC11.96□□□□□ -0.49
Trim50Q810I2 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim50Q810I2 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.96□□□□□ -0.49
Trim50Q810I2 Gm44882-201ENSMUST00000205702 802 ntBASIC11.96□□□□□ -0.49
Trim50Q810I2 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.96□□□□□ -0.49
Trim50Q810I2 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim50Q810I2 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim50Q810I2 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim50Q810I2 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim50Q810I2 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trim50Q810I2 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim50Q810I2 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim50Q810I2 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim50Q810I2 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim50Q810I2 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim50Q810I2 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim50Q810I2 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
Trim50Q810I2 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim50Q810I2 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim50Q810I2 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim50Q810I2 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Trim50Q810I2 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim50Q810I2 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim50Q810I2 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.96□□□□□ -0.5
Trim50Q810I2 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim50Q810I2 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trim50Q810I2 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trim50Q810I2 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim50Q810I2 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Trim50Q810I2 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim50Q810I2 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim50Q810I2 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim50Q810I2 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim50Q810I2 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim50Q810I2 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.95□□□□□ -0.5
Trim50Q810I2 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim50Q810I2 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.95□□□□□ -0.5
Trim50Q810I2 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim50Q810I2 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim50Q810I2 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim50Q810I2 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim50Q810I2 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.95□□□□□ -0.5
Trim50Q810I2 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim50Q810I2 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trim50Q810I2 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trim50Q810I2 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trim50Q810I2 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trim50Q810I2 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trim50Q810I2 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms