Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lrrtm4Q80XG9 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lrrtm4Q80XG9 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lrrtm4Q80XG9 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lrrtm4Q80XG9 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Lrrtm4Q80XG9 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.98□□□□□ -0.49
Lrrtm4Q80XG9 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lrrtm4Q80XG9 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lrrtm4Q80XG9 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Cog3-203ENSMUST00000227473 4197 ntBASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Gm23912-201ENSMUST00000104687 87 ntBASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Gm11989-201ENSMUST00000117240 672 ntBASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Gm11362-201ENSMUST00000118838 850 ntBASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Gm44262-201ENSMUST00000204969 372 ntBASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lrrtm4Q80XG9 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lrrtm4Q80XG9 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lrrtm4Q80XG9 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.96□□□□□ -0.49
Lrrtm4Q80XG9 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.96□□□□□ -0.49
Lrrtm4Q80XG9 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Lrrtm4Q80XG9 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lrrtm4Q80XG9 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lrrtm4Q80XG9 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lrrtm4Q80XG9 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lrrtm4Q80XG9 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lrrtm4Q80XG9 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.96□□□□□ -0.49
Lrrtm4Q80XG9 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lrrtm4Q80XG9 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lrrtm4Q80XG9 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.96□□□□□ -0.49
Lrrtm4Q80XG9 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Lrrtm4Q80XG9 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.96□□□□□ -0.49
Lrrtm4Q80XG9 Gm14017-201ENSMUST00000121934 386 ntBASIC11.96□□□□□ -0.49
Lrrtm4Q80XG9 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.96□□□□□ -0.49
Lrrtm4Q80XG9 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lrrtm4Q80XG9 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lrrtm4Q80XG9 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.96□□□□□ -0.49
Lrrtm4Q80XG9 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Lrrtm4Q80XG9 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.96□□□□□ -0.49
Lrrtm4Q80XG9 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.96□□□□□ -0.49
Lrrtm4Q80XG9 Gm29199-201ENSMUST00000187766 775 ntBASIC11.96□□□□□ -0.49
Lrrtm4Q80XG9 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.96□□□□□ -0.49
Lrrtm4Q80XG9 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.96□□□□□ -0.49
Lrrtm4Q80XG9 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.96□□□□□ -0.49
Lrrtm4Q80XG9 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.96□□□□□ -0.49
Lrrtm4Q80XG9 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.96□□□□□ -0.49
Lrrtm4Q80XG9 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.96□□□□□ -0.49
Lrrtm4Q80XG9 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms