Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp8Q80U87 Gm24526-201ENSMUST00000082921 158 ntBASIC12.36□□□□□ -0.43
Usp8Q80U87 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp8Q80U87 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Usp8Q80U87 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Usp8Q80U87 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Usp8Q80U87 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp8Q80U87 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp8Q80U87 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp8Q80U87 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp8Q80U87 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp8Q80U87 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.36□□□□□ -0.43
Usp8Q80U87 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp8Q80U87 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp8Q80U87 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp8Q80U87 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp8Q80U87 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp8Q80U87 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp8Q80U87 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp8Q80U87 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Usp8Q80U87 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp8Q80U87 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.35□□□□□ -0.43
Usp8Q80U87 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp8Q80U87 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp8Q80U87 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Usp8Q80U87 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Usp8Q80U87 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp8Q80U87 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Usp8Q80U87 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp8Q80U87 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Usp8Q80U87 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.35□□□□□ -0.43
Usp8Q80U87 Gm27682-201ENSMUST00000183930 110 ntBASIC12.35□□□□□ -0.43
Usp8Q80U87 Gm38092-201ENSMUST00000195600 653 ntBASIC12.35□□□□□ -0.43
Usp8Q80U87 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.35□□□□□ -0.43
Usp8Q80U87 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.35□□□□□ -0.43
Usp8Q80U87 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp8Q80U87 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp8Q80U87 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp8Q80U87 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Usp8Q80U87 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Usp8Q80U87 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.35□□□□□ -0.43
Usp8Q80U87 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.35□□□□□ -0.43
Usp8Q80U87 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp8Q80U87 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Usp8Q80U87 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp8Q80U87 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp8Q80U87 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp8Q80U87 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Usp8Q80U87 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp8Q80U87 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp8Q80U87 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.34□□□□□ -0.43
Usp8Q80U87 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Usp8Q80U87 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Usp8Q80U87 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp8Q80U87 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Usp8Q80U87 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp8Q80U87 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp8Q80U87 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp8Q80U87 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp8Q80U87 Gm4984-201ENSMUST00000115987 360 ntBASIC12.34□□□□□ -0.43
Usp8Q80U87 Gm13492-201ENSMUST00000119772 665 ntBASIC12.34□□□□□ -0.43
Usp8Q80U87 Gm16177-201ENSMUST00000120728 718 ntBASIC12.34□□□□□ -0.43
Usp8Q80U87 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.34□□□□□ -0.43
Usp8Q80U87 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Usp8Q80U87 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.34□□□□□ -0.43
Usp8Q80U87 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.34□□□□□ -0.43
Usp8Q80U87 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp8Q80U87 Gm10268-201ENSMUST00000085340 555 ntBASIC12.34□□□□□ -0.43
Usp8Q80U87 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.34□□□□□ -0.43
Usp8Q80U87 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp8Q80U87 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp8Q80U87 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Usp8Q80U87 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp8Q80U87 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.34□□□□□ -0.43
Usp8Q80U87 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Usp8Q80U87 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Usp8Q80U87 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp8Q80U87 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp8Q80U87 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp8Q80U87 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp8Q80U87 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp8Q80U87 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Usp8Q80U87 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Usp8Q80U87 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Usp8Q80U87 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Usp8Q80U87 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Usp8Q80U87 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC12.33□□□□□ -0.43
Usp8Q80U87 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Usp8Q80U87 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.33□□□□□ -0.44
Usp8Q80U87 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp8Q80U87 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp8Q80U87 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Usp8Q80U87 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Usp8Q80U87 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp8Q80U87 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp8Q80U87 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Usp8Q80U87 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.33□□□□□ -0.44
Usp8Q80U87 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp8Q80U87 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.33□□□□□ -0.44
Usp8Q80U87 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms