Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Gm12314-201ENSMUST00000118104 538 ntBASIC13.46□□□□□ -0.25
Ush1gQ80T11 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ush1gQ80T11 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC13.46□□□□□ -0.25
Ush1gQ80T11 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ush1gQ80T11 Gm23699-201ENSMUST00000158835 135 ntBASIC13.46□□□□□ -0.25
Ush1gQ80T11 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC13.46□□□□□ -0.25
Ush1gQ80T11 Gm5051-201ENSMUST00000204085 485 ntBASIC13.46□□□□□ -0.25
Ush1gQ80T11 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.46□□□□□ -0.25
Ush1gQ80T11 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
Ush1gQ80T11 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ush1gQ80T11 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ush1gQ80T11 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.46□□□□□ -0.25
Ush1gQ80T11 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ush1gQ80T11 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ush1gQ80T11 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ush1gQ80T11 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ush1gQ80T11 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.46□□□□□ -0.25
Ush1gQ80T11 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ush1gQ80T11 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ush1gQ80T11 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Ush1gQ80T11 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ush1gQ80T11 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ush1gQ80T11 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
Ush1gQ80T11 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ush1gQ80T11 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ush1gQ80T11 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.46□□□□□ -0.26
Ush1gQ80T11 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.46□□□□□ -0.26
Ush1gQ80T11 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ush1gQ80T11 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Ush1gQ80T11 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ush1gQ80T11 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Ush1gQ80T11 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Ush1gQ80T11 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Ush1gQ80T11 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Ush1gQ80T11 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Ush1gQ80T11 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ush1gQ80T11 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ush1gQ80T11 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ush1gQ80T11 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ush1gQ80T11 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ush1gQ80T11 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ush1gQ80T11 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ush1gQ80T11 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Ush1gQ80T11 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ush1gQ80T11 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ush1gQ80T11 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ush1gQ80T11 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.45□□□□□ -0.26
Ush1gQ80T11 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Ush1gQ80T11 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.45□□□□□ -0.26
Ush1gQ80T11 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Ush1gQ80T11 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ush1gQ80T11 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ush1gQ80T11 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.45□□□□□ -0.26
Ush1gQ80T11 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC13.45□□□□□ -0.26
Ush1gQ80T11 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ush1gQ80T11 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Ush1gQ80T11 Gm14644-201ENSMUST00000116671 647 ntBASIC13.45□□□□□ -0.26
Ush1gQ80T11 Gm14760-201ENSMUST00000121831 999 ntBASIC13.45□□□□□ -0.26
Ush1gQ80T11 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ush1gQ80T11 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ush1gQ80T11 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC13.45□□□□□ -0.26
Ush1gQ80T11 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ush1gQ80T11 Gm44545-201ENSMUST00000208262 746 ntBASIC13.45□□□□□ -0.26
Ush1gQ80T11 Gm45770-201ENSMUST00000212105 616 ntBASIC13.45□□□□□ -0.26
Ush1gQ80T11 AC159819.2-201ENSMUST00000216151 342 ntBASIC13.45□□□□□ -0.26
Ush1gQ80T11 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ush1gQ80T11 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ush1gQ80T11 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ush1gQ80T11 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ush1gQ80T11 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ush1gQ80T11 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ush1gQ80T11 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ush1gQ80T11 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ush1gQ80T11 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ush1gQ80T11 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ush1gQ80T11 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Ush1gQ80T11 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ush1gQ80T11 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ush1gQ80T11 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ush1gQ80T11 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ush1gQ80T11 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ush1gQ80T11 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ush1gQ80T11 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ush1gQ80T11 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ush1gQ80T11 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ush1gQ80T11 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.44□□□□□ -0.26
Ush1gQ80T11 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ush1gQ80T11 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ush1gQ80T11 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC13.44□□□□□ -0.26
Ush1gQ80T11 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Ush1gQ80T11 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC13.44□□□□□ -0.26
Ush1gQ80T11 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ush1gQ80T11 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ush1gQ80T11 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ush1gQ80T11 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC13.44□□□□□ -0.26
Ush1gQ80T11 Gm27438-201ENSMUST00000183480 110 ntBASIC13.44□□□□□ -0.26
Ush1gQ80T11 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC13.44□□□□□ -0.26
Ush1gQ80T11 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ush1gQ80T11 AC125486.1-201ENSMUST00000218701 320 ntBASIC13.44□□□□□ -0.26
Ush1gQ80T11 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms