Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rad54bQ6PFE3 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rad54bQ6PFE3 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rad54bQ6PFE3 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Rad54bQ6PFE3 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Rad54bQ6PFE3 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rad54bQ6PFE3 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rad54bQ6PFE3 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rad54bQ6PFE3 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rad54bQ6PFE3 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rad54bQ6PFE3 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rad54bQ6PFE3 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rad54bQ6PFE3 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rad54bQ6PFE3 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rad54bQ6PFE3 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rad54bQ6PFE3 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rad54bQ6PFE3 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rad54bQ6PFE3 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.37□□□□□ -0.43
Rad54bQ6PFE3 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rad54bQ6PFE3 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rad54bQ6PFE3 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rad54bQ6PFE3 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.37□□□□□ -0.43
Rad54bQ6PFE3 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rad54bQ6PFE3 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rad54bQ6PFE3 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rad54bQ6PFE3 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rad54bQ6PFE3 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Rad54bQ6PFE3 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rad54bQ6PFE3 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rad54bQ6PFE3 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rad54bQ6PFE3 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rad54bQ6PFE3 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rad54bQ6PFE3 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.36□□□□□ -0.43
Rad54bQ6PFE3 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rad54bQ6PFE3 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rad54bQ6PFE3 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Rad54bQ6PFE3 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rad54bQ6PFE3 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rad54bQ6PFE3 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rad54bQ6PFE3 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rad54bQ6PFE3 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.36□□□□□ -0.43
Rad54bQ6PFE3 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Rad54bQ6PFE3 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.36□□□□□ -0.43
Rad54bQ6PFE3 Gm42693-201ENSMUST00000196779 631 ntBASIC12.36□□□□□ -0.43
Rad54bQ6PFE3 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rad54bQ6PFE3 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rad54bQ6PFE3 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.36□□□□□ -0.43
Rad54bQ6PFE3 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rad54bQ6PFE3 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.36□□□□□ -0.43
Rad54bQ6PFE3 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Rad54bQ6PFE3 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rad54bQ6PFE3 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Rad54bQ6PFE3 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rad54bQ6PFE3 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rad54bQ6PFE3 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rad54bQ6PFE3 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rad54bQ6PFE3 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.36□□□□□ -0.43
Rad54bQ6PFE3 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.36□□□□□ -0.43
Rad54bQ6PFE3 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.36□□□□□ -0.43
Rad54bQ6PFE3 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rad54bQ6PFE3 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rad54bQ6PFE3 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.36□□□□□ -0.43
Rad54bQ6PFE3 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rad54bQ6PFE3 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rad54bQ6PFE3 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rad54bQ6PFE3 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rad54bQ6PFE3 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rad54bQ6PFE3 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rad54bQ6PFE3 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rad54bQ6PFE3 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rad54bQ6PFE3 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rad54bQ6PFE3 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rad54bQ6PFE3 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rad54bQ6PFE3 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rad54bQ6PFE3 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.35□□□□□ -0.43
Rad54bQ6PFE3 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rad54bQ6PFE3 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rad54bQ6PFE3 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.35□□□□□ -0.43
Rad54bQ6PFE3 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.35□□□□□ -0.43
Rad54bQ6PFE3 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.35□□□□□ -0.43
Rad54bQ6PFE3 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rad54bQ6PFE3 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rad54bQ6PFE3 Gm23912-201ENSMUST00000104687 87 ntBASIC12.35□□□□□ -0.43
Rad54bQ6PFE3 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rad54bQ6PFE3 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.35□□□□□ -0.43
Rad54bQ6PFE3 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.35□□□□□ -0.43
Rad54bQ6PFE3 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rad54bQ6PFE3 Gm6222-202ENSMUST00000182143 629 ntBASIC12.35□□□□□ -0.43
Rad54bQ6PFE3 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rad54bQ6PFE3 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.35□□□□□ -0.43
Rad54bQ6PFE3 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rad54bQ6PFE3 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rad54bQ6PFE3 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rad54bQ6PFE3 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rad54bQ6PFE3 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Rad54bQ6PFE3 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rad54bQ6PFE3 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rad54bQ6PFE3 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rad54bQ6PFE3 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rad54bQ6PFE3 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms