Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 Gm15595-201ENSMUST00000120840 961 ntBASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 Mir6998-201ENSMUST00000183343 64 ntBASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 Gm8956-201ENSMUST00000203939 825 ntBASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 AC129219.2-201ENSMUST00000224324 701 ntBASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 AC174797.2-202ENSMUST00000225729 568 ntBASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 Mirlet7i-201ENSMUST00000083472 85 ntBASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Snrnp40Q6PE01 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Snrnp40Q6PE01 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Snrnp40Q6PE01 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Snrnp40Q6PE01 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Snrnp40Q6PE01 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Snrnp40Q6PE01 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Snrnp40Q6PE01 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.79□□□□□ -0.68
Snrnp40Q6PE01 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Snrnp40Q6PE01 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Snrnp40Q6PE01 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC10.79□□□□□ -0.68
Snrnp40Q6PE01 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Snrnp40Q6PE01 Gm1848-201ENSMUST00000120711 789 ntBASIC10.79□□□□□ -0.68
Snrnp40Q6PE01 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.79□□□□□ -0.68
Snrnp40Q6PE01 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC10.79□□□□□ -0.68
Snrnp40Q6PE01 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC10.79□□□□□ -0.68
Snrnp40Q6PE01 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Snrnp40Q6PE01 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.79□□□□□ -0.68
Snrnp40Q6PE01 Gm37299-201ENSMUST00000193951 826 ntBASIC10.79□□□□□ -0.68
Snrnp40Q6PE01 Gm37028-201ENSMUST00000194276 107 ntBASIC10.79□□□□□ -0.68
Snrnp40Q6PE01 Gm19166-201ENSMUST00000196041 1063 ntBASIC10.79□□□□□ -0.68
Snrnp40Q6PE01 Gm18711-201ENSMUST00000199341 750 ntBASIC10.79□□□□□ -0.68
Snrnp40Q6PE01 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC10.79□□□□□ -0.68
Snrnp40Q6PE01 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC10.79□□□□□ -0.68
Snrnp40Q6PE01 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC10.79□□□□□ -0.68
Snrnp40Q6PE01 Gm45575-201ENSMUST00000210283 548 ntBASIC10.79□□□□□ -0.68
Snrnp40Q6PE01 Gm3028-201ENSMUST00000213805 1119 ntBASIC10.79□□□□□ -0.68
Snrnp40Q6PE01 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Snrnp40Q6PE01 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC10.79□□□□□ -0.68
Snrnp40Q6PE01 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC10.79□□□□□ -0.68
Snrnp40Q6PE01 AC115122.1-201ENSMUST00000224850 1040 ntBASIC10.79□□□□□ -0.68
Snrnp40Q6PE01 AC134860.1-201ENSMUST00000224867 660 ntBASIC10.79□□□□□ -0.68
Snrnp40Q6PE01 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Snrnp40Q6PE01 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Snrnp40Q6PE01 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Snrnp40Q6PE01 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC10.79□□□□□ -0.68
Snrnp40Q6PE01 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Snrnp40Q6PE01 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Snrnp40Q6PE01 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC10.79□□□□□ -0.68
Snrnp40Q6PE01 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Snrnp40Q6PE01 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Snrnp40Q6PE01 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC10.79□□□□□ -0.68
Snrnp40Q6PE01 Gm43677-201ENSMUST00000198098 2378 ntBASIC10.79□□□□□ -0.68
Snrnp40Q6PE01 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Snrnp40Q6PE01 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Gm30238-201ENSMUST00000195528 2603 ntBASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Gm15566-201ENSMUST00000121130 590 ntBASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Gm13263-201ENSMUST00000121271 838 ntBASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Gm8737-201ENSMUST00000122208 642 ntBASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Gm13182-201ENSMUST00000122241 312 ntBASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms