Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf220Q6PDX6 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Rnf220Q6PDX6 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf220Q6PDX6 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf220Q6PDX6 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.63□□□□□ -0.55
Rnf220Q6PDX6 Gm45828-201ENSMUST00000206938 1836 ntBASIC11.63□□□□□ -0.55
Rnf220Q6PDX6 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Rnf220Q6PDX6 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.63□□□□□ -0.55
Rnf220Q6PDX6 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.63□□□□□ -0.55
Rnf220Q6PDX6 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf220Q6PDX6 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.63□□□□□ -0.55
Rnf220Q6PDX6 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf220Q6PDX6 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Rnf220Q6PDX6 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf220Q6PDX6 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf220Q6PDX6 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf220Q6PDX6 Gm15920-201ENSMUST00000118998 402 ntBASIC11.63□□□□□ -0.55
Rnf220Q6PDX6 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf220Q6PDX6 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.63□□□□□ -0.55
Rnf220Q6PDX6 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.63□□□□□ -0.55
Rnf220Q6PDX6 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Rnf220Q6PDX6 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.63□□□□□ -0.55
Rnf220Q6PDX6 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.63□□□□□ -0.55
Rnf220Q6PDX6 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.63□□□□□ -0.55
Rnf220Q6PDX6 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf220Q6PDX6 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC11.63□□□□□ -0.55
Rnf220Q6PDX6 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.63□□□□□ -0.55
Rnf220Q6PDX6 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.63□□□□□ -0.55
Rnf220Q6PDX6 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf220Q6PDX6 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf220Q6PDX6 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf220Q6PDX6 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf220Q6PDX6 Gm37333-201ENSMUST00000192904 2251 ntBASIC11.63□□□□□ -0.55
Rnf220Q6PDX6 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Rnf220Q6PDX6 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf220Q6PDX6 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf220Q6PDX6 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Rnf220Q6PDX6 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf220Q6PDX6 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf220Q6PDX6 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Rnf220Q6PDX6 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf220Q6PDX6 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf220Q6PDX6 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf220Q6PDX6 Syt7-204ENSMUST00000223586 1344 ntBASIC11.62□□□□□ -0.55
Rnf220Q6PDX6 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf220Q6PDX6 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf220Q6PDX6 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf220Q6PDX6 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf220Q6PDX6 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf220Q6PDX6 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Rnf220Q6PDX6 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.62□□□□□ -0.55
Rnf220Q6PDX6 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
Rnf220Q6PDX6 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf220Q6PDX6 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.62□□□□□ -0.55
Rnf220Q6PDX6 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf220Q6PDX6 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.62□□□□□ -0.55
Rnf220Q6PDX6 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.62□□□□□ -0.55
Rnf220Q6PDX6 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf220Q6PDX6 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf220Q6PDX6 Gm9630-201ENSMUST00000178304 885 ntBASIC11.62□□□□□ -0.55
Rnf220Q6PDX6 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms