Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Chd4Q6PDQ2 Gm9645-201ENSMUST00000197131 792 ntBASIC15.74■□□□□ 0.11
Chd4Q6PDQ2 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC15.74■□□□□ 0.11
Chd4Q6PDQ2 Gm9139-201ENSMUST00000218817 700 ntBASIC15.74■□□□□ 0.11
Chd4Q6PDQ2 Zfp125-201ENSMUST00000079237 2488 ntBASIC15.74■□□□□ 0.11
Chd4Q6PDQ2 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Chd4Q6PDQ2 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chd4Q6PDQ2 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Chd4Q6PDQ2 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chd4Q6PDQ2 Gm4900-201ENSMUST00000222046 1628 ntBASIC15.74■□□□□ 0.11
Chd4Q6PDQ2 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chd4Q6PDQ2 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC15.74■□□□□ 0.11
Chd4Q6PDQ2 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chd4Q6PDQ2 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Chd4Q6PDQ2 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Chd4Q6PDQ2 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chd4Q6PDQ2 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chd4Q6PDQ2 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chd4Q6PDQ2 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
Chd4Q6PDQ2 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Chd4Q6PDQ2 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chd4Q6PDQ2 Gm20495-201ENSMUST00000173902 235 ntBASIC15.74■□□□□ 0.11
Chd4Q6PDQ2 Gm7593-201ENSMUST00000187246 644 ntBASIC15.74■□□□□ 0.11
Chd4Q6PDQ2 Gm5982-201ENSMUST00000196234 512 ntBASIC15.74■□□□□ 0.11
Chd4Q6PDQ2 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chd4Q6PDQ2 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chd4Q6PDQ2 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chd4Q6PDQ2 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Chd4Q6PDQ2 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
Chd4Q6PDQ2 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Chd4Q6PDQ2 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chd4Q6PDQ2 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chd4Q6PDQ2 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC15.74■□□□□ 0.11
Chd4Q6PDQ2 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chd4Q6PDQ2 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Chd4Q6PDQ2 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chd4Q6PDQ2 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Chd4Q6PDQ2 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Chd4Q6PDQ2 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Chd4Q6PDQ2 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chd4Q6PDQ2 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Chd4Q6PDQ2 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Chd4Q6PDQ2 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chd4Q6PDQ2 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chd4Q6PDQ2 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chd4Q6PDQ2 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chd4Q6PDQ2 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Chd4Q6PDQ2 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chd4Q6PDQ2 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chd4Q6PDQ2 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Chd4Q6PDQ2 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC15.73■□□□□ 0.11
Chd4Q6PDQ2 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Chd4Q6PDQ2 Gm5100-201ENSMUST00000195631 589 ntBASIC15.73■□□□□ 0.11
Chd4Q6PDQ2 Gm6108-201ENSMUST00000208365 367 ntBASIC15.73■□□□□ 0.11
Chd4Q6PDQ2 AC115122.1-201ENSMUST00000224850 1040 ntBASIC15.73■□□□□ 0.11
Chd4Q6PDQ2 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chd4Q6PDQ2 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Chd4Q6PDQ2 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC15.73■□□□□ 0.11
Chd4Q6PDQ2 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chd4Q6PDQ2 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chd4Q6PDQ2 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chd4Q6PDQ2 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
Chd4Q6PDQ2 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chd4Q6PDQ2 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chd4Q6PDQ2 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chd4Q6PDQ2 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chd4Q6PDQ2 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Chd4Q6PDQ2 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chd4Q6PDQ2 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chd4Q6PDQ2 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Chd4Q6PDQ2 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chd4Q6PDQ2 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chd4Q6PDQ2 Gm12030-201ENSMUST00000121917 223 ntBASIC15.72■□□□□ 0.11
Chd4Q6PDQ2 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC15.72■□□□□ 0.11
Chd4Q6PDQ2 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Chd4Q6PDQ2 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Chd4Q6PDQ2 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Chd4Q6PDQ2 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chd4Q6PDQ2 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chd4Q6PDQ2 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Chd4Q6PDQ2 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Chd4Q6PDQ2 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chd4Q6PDQ2 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chd4Q6PDQ2 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Chd4Q6PDQ2 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chd4Q6PDQ2 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chd4Q6PDQ2 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Chd4Q6PDQ2 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chd4Q6PDQ2 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chd4Q6PDQ2 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC15.72■□□□□ 0.11
Chd4Q6PDQ2 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC15.72■□□□□ 0.11
Chd4Q6PDQ2 Gm7114-201ENSMUST00000190159 1789 ntBASIC15.72■□□□□ 0.11
Chd4Q6PDQ2 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chd4Q6PDQ2 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Chd4Q6PDQ2 Gm6407-201ENSMUST00000176468 549 ntBASIC15.72■□□□□ 0.11
Chd4Q6PDQ2 Gm27910-201ENSMUST00000185004 107 ntBASIC15.72■□□□□ 0.11
Chd4Q6PDQ2 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC15.72■□□□□ 0.11
Chd4Q6PDQ2 Gm44315-201ENSMUST00000203041 219 ntBASIC15.72■□□□□ 0.11
Chd4Q6PDQ2 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC15.72■□□□□ 0.11
Chd4Q6PDQ2 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms