Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcc2Q6PDG5 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcc2Q6PDG5 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Smarcc2Q6PDG5 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcc2Q6PDG5 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC14.34□□□□□ -0.11
Smarcc2Q6PDG5 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcc2Q6PDG5 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC14.34□□□□□ -0.11
Smarcc2Q6PDG5 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcc2Q6PDG5 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Smarcc2Q6PDG5 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcc2Q6PDG5 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcc2Q6PDG5 AC167669.2-201ENSMUST00000224417 1620 ntBASIC14.33□□□□□ -0.11
Smarcc2Q6PDG5 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Smarcc2Q6PDG5 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Smarcc2Q6PDG5 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Smarcc2Q6PDG5 Gm37472-201ENSMUST00000192342 4052 ntBASIC14.33□□□□□ -0.11
Smarcc2Q6PDG5 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Smarcc2Q6PDG5 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Smarcc2Q6PDG5 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC14.33□□□□□ -0.11
Smarcc2Q6PDG5 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC14.33□□□□□ -0.12
Smarcc2Q6PDG5 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcc2Q6PDG5 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcc2Q6PDG5 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Smarcc2Q6PDG5 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
Smarcc2Q6PDG5 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC14.33□□□□□ -0.12
Smarcc2Q6PDG5 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Smarcc2Q6PDG5 Gm20482-202ENSMUST00000174729 825 ntBASIC14.33□□□□□ -0.12
Smarcc2Q6PDG5 Gm37201-201ENSMUST00000191845 523 ntBASIC14.33□□□□□ -0.12
Smarcc2Q6PDG5 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC14.33□□□□□ -0.12
Smarcc2Q6PDG5 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC14.33□□□□□ -0.12
Smarcc2Q6PDG5 AC122371.3-201ENSMUST00000223402 1061 ntBASIC14.33□□□□□ -0.12
Smarcc2Q6PDG5 AC166095.1-201ENSMUST00000223731 1241 ntBASIC14.33□□□□□ -0.12
Smarcc2Q6PDG5 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcc2Q6PDG5 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcc2Q6PDG5 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Smarcc2Q6PDG5 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcc2Q6PDG5 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Smarcc2Q6PDG5 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcc2Q6PDG5 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcc2Q6PDG5 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcc2Q6PDG5 AC166574.4-201ENSMUST00000227165 1937 ntBASIC14.33□□□□□ -0.12
Smarcc2Q6PDG5 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Smarcc2Q6PDG5 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcc2Q6PDG5 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc2Q6PDG5 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc2Q6PDG5 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc2Q6PDG5 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc2Q6PDG5 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc2Q6PDG5 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc2Q6PDG5 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Smarcc2Q6PDG5 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc2Q6PDG5 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc2Q6PDG5 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc2Q6PDG5 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Smarcc2Q6PDG5 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Smarcc2Q6PDG5 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc2Q6PDG5 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc2Q6PDG5 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Smarcc2Q6PDG5 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC14.32□□□□□ -0.12
Smarcc2Q6PDG5 Gm14726-201ENSMUST00000120623 896 ntBASIC14.32□□□□□ -0.12
Smarcc2Q6PDG5 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Smarcc2Q6PDG5 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc2Q6PDG5 Gm27023-201ENSMUST00000182372 285 ntBASIC14.32□□□□□ -0.12
Smarcc2Q6PDG5 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC14.32□□□□□ -0.12
Smarcc2Q6PDG5 Gm37259-201ENSMUST00000193903 849 ntBASIC14.32□□□□□ -0.12
Smarcc2Q6PDG5 Gm31256-201ENSMUST00000194705 506 ntBASIC14.32□□□□□ -0.12
Smarcc2Q6PDG5 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC14.32□□□□□ -0.12
Smarcc2Q6PDG5 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc2Q6PDG5 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC14.32□□□□□ -0.12
Smarcc2Q6PDG5 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Smarcc2Q6PDG5 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc2Q6PDG5 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc2Q6PDG5 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc2Q6PDG5 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc2Q6PDG5 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc2Q6PDG5 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc2Q6PDG5 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc2Q6PDG5 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc2Q6PDG5 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc2Q6PDG5 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Smarcc2Q6PDG5 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc2Q6PDG5 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc2Q6PDG5 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Smarcc2Q6PDG5 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Smarcc2Q6PDG5 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC14.32□□□□□ -0.12
Smarcc2Q6PDG5 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc2Q6PDG5 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Smarcc2Q6PDG5 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc2Q6PDG5 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms