Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
VcanQ62059 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC11.22□□□□□ -0.61
VcanQ62059 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
VcanQ62059 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VcanQ62059 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VcanQ62059 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
VcanQ62059 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.21□□□□□ -0.61
VcanQ62059 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
VcanQ62059 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
VcanQ62059 Gm15625-201ENSMUST00000117617 1093 ntBASIC11.21□□□□□ -0.61
VcanQ62059 Gm12345-201ENSMUST00000119288 898 ntBASIC11.21□□□□□ -0.61
VcanQ62059 Gm5395-201ENSMUST00000121650 915 ntBASIC11.21□□□□□ -0.61
VcanQ62059 Gm2044-201ENSMUST00000130771 911 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
VcanQ62059 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC11.21□□□□□ -0.61
VcanQ62059 AC117769.1-201ENSMUST00000224716 1120 ntBASIC11.21□□□□□ -0.61
VcanQ62059 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
VcanQ62059 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
VcanQ62059 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC11.21□□□□□ -0.61
VcanQ62059 Gm15519-201ENSMUST00000120088 1566 ntBASIC11.21□□□□□ -0.61
VcanQ62059 Gm6741-201ENSMUST00000057074 1330 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
VcanQ62059 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.21□□□□□ -0.61
VcanQ62059 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
VcanQ62059 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
VcanQ62059 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
VcanQ62059 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
VcanQ62059 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
VcanQ62059 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
VcanQ62059 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
VcanQ62059 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
VcanQ62059 Gm8384-201ENSMUST00000190905 704 ntBASIC11.21□□□□□ -0.62
VcanQ62059 Gm19931-201ENSMUST00000198920 368 ntBASIC11.21□□□□□ -0.62
VcanQ62059 Gm42375-201ENSMUST00000206226 745 ntTSL 5 BASIC11.21□□□□□ -0.62
VcanQ62059 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.21□□□□□ -0.62
VcanQ62059 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
VcanQ62059 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
VcanQ62059 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
VcanQ62059 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
VcanQ62059 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.62
VcanQ62059 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
VcanQ62059 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
VcanQ62059 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
VcanQ62059 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
VcanQ62059 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
VcanQ62059 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
VcanQ62059 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.2□□□□□ -0.62
VcanQ62059 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.2□□□□□ -0.62
VcanQ62059 Gm37981-201ENSMUST00000194280 535 ntBASIC11.2□□□□□ -0.62
VcanQ62059 Gm5714-201ENSMUST00000197343 566 ntBASIC11.2□□□□□ -0.62
VcanQ62059 Gm44506-201ENSMUST00000206278 965 ntBASIC11.2□□□□□ -0.62
VcanQ62059 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC11.2□□□□□ -0.62
VcanQ62059 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
VcanQ62059 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VcanQ62059 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VcanQ62059 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VcanQ62059 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
VcanQ62059 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VcanQ62059 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
VcanQ62059 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VcanQ62059 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.2□□□□□ -0.62
VcanQ62059 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
VcanQ62059 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
VcanQ62059 Gm11996-201ENSMUST00000117538 915 ntBASIC11.2□□□□□ -0.62
VcanQ62059 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC11.2□□□□□ -0.62
VcanQ62059 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
VcanQ62059 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
VcanQ62059 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VcanQ62059 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VcanQ62059 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VcanQ62059 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
VcanQ62059 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
VcanQ62059 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
VcanQ62059 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VcanQ62059 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
VcanQ62059 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VcanQ62059 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
VcanQ62059 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
VcanQ62059 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
VcanQ62059 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.2□□□□□ -0.62
VcanQ62059 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
VcanQ62059 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
VcanQ62059 Mir8093-201ENSMUST00000185043 137 ntBASIC11.2□□□□□ -0.62
VcanQ62059 Gm38103-201ENSMUST00000191707 864 ntBASIC11.2□□□□□ -0.62
VcanQ62059 Gm37207-201ENSMUST00000194284 296 ntBASIC11.2□□□□□ -0.62
VcanQ62059 Gm30671-201ENSMUST00000214898 318 ntBASIC11.2□□□□□ -0.62
VcanQ62059 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.2□□□□□ -0.62
VcanQ62059 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VcanQ62059 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
VcanQ62059 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
VcanQ62059 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.19□□□□□ -0.62
VcanQ62059 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VcanQ62059 Gm13192-201ENSMUST00000101199 208 ntBASIC11.19□□□□□ -0.62
VcanQ62059 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VcanQ62059 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC11.19□□□□□ -0.62
VcanQ62059 Gm13039-201ENSMUST00000118638 794 ntBASIC11.19□□□□□ -0.62
VcanQ62059 Gm10443-201ENSMUST00000119024 210 ntBASIC11.19□□□□□ -0.62
VcanQ62059 Gm15982-201ENSMUST00000121681 554 ntBASIC11.19□□□□□ -0.62
VcanQ62059 Gm13827-201ENSMUST00000148801 372 ntBASIC11.19□□□□□ -0.62
VcanQ62059 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
VcanQ62059 Gm20568-201ENSMUST00000197129 208 ntBASIC11.19□□□□□ -0.62
VcanQ62059 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms