Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd1Q61466 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Smarcd1Q61466 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd1Q61466 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd1Q61466 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd1Q61466 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd1Q61466 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.79□□□□□ -0.36
Smarcd1Q61466 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd1Q61466 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd1Q61466 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Smarcd1Q61466 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd1Q61466 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.78□□□□□ -0.36
Smarcd1Q61466 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Smarcd1Q61466 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd1Q61466 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd1Q61466 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd1Q61466 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd1Q61466 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd1Q61466 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd1Q61466 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.78□□□□□ -0.36
Smarcd1Q61466 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd1Q61466 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd1Q61466 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd1Q61466 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd1Q61466 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Smarcd1Q61466 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd1Q61466 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd1Q61466 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.78□□□□□ -0.36
Smarcd1Q61466 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd1Q61466 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd1Q61466 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Smarcd1Q61466 Gm14208-201ENSMUST00000119645 678 ntBASIC12.78□□□□□ -0.36
Smarcd1Q61466 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.78□□□□□ -0.36
Smarcd1Q61466 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.78□□□□□ -0.36
Smarcd1Q61466 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd1Q61466 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.78□□□□□ -0.36
Smarcd1Q61466 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.78□□□□□ -0.36
Smarcd1Q61466 Gm24749-201ENSMUST00000157838 343 ntBASIC12.78□□□□□ -0.36
Smarcd1Q61466 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd1Q61466 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd1Q61466 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Smarcd1Q61466 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.78□□□□□ -0.36
Smarcd1Q61466 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.78□□□□□ -0.36
Smarcd1Q61466 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.78□□□□□ -0.36
Smarcd1Q61466 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.78□□□□□ -0.36
Smarcd1Q61466 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd1Q61466 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd1Q61466 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd1Q61466 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd1Q61466 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd1Q61466 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd1Q61466 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.78□□□□□ -0.36
Smarcd1Q61466 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.78□□□□□ -0.36
Smarcd1Q61466 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd1Q61466 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd1Q61466 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd1Q61466 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd1Q61466 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd1Q61466 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smarcd1Q61466 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smarcd1Q61466 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.77□□□□□ -0.36
Smarcd1Q61466 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smarcd1Q61466 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smarcd1Q61466 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smarcd1Q61466 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Smarcd1Q61466 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smarcd1Q61466 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Smarcd1Q61466 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Smarcd1Q61466 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Smarcd1Q61466 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcd1Q61466 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcd1Q61466 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcd1Q61466 Gm14028-201ENSMUST00000117434 479 ntBASIC12.77□□□□□ -0.37
Smarcd1Q61466 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcd1Q61466 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.77□□□□□ -0.37
Smarcd1Q61466 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Smarcd1Q61466 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.77□□□□□ -0.37
Smarcd1Q61466 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcd1Q61466 Gm27341-201ENSMUST00000183570 106 ntBASIC12.77□□□□□ -0.37
Smarcd1Q61466 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.77□□□□□ -0.37
Smarcd1Q61466 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.77□□□□□ -0.37
Smarcd1Q61466 AY036118-201ENSMUST00000200021 923 ntBASIC12.77□□□□□ -0.37
Smarcd1Q61466 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.77□□□□□ -0.37
Smarcd1Q61466 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.77□□□□□ -0.37
Smarcd1Q61466 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.77□□□□□ -0.37
Smarcd1Q61466 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Smarcd1Q61466 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Smarcd1Q61466 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcd1Q61466 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.77□□□□□ -0.37
Smarcd1Q61466 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcd1Q61466 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Smarcd1Q61466 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcd1Q61466 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcd1Q61466 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcd1Q61466 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Smarcd1Q61466 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcd1Q61466 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcd1Q61466 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd1Q61466 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd1Q61466 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms