Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Vsx2Q61412 Gm43051-201ENSMUST00000201096 2678 ntBASIC12□□□□□ -0.49
Vsx2Q61412 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vsx2Q61412 Nupl1-206ENSMUST00000225111 2936 ntBASIC12□□□□□ -0.49
Vsx2Q61412 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12□□□□□ -0.49
Vsx2Q61412 Gm43823-201ENSMUST00000197391 1808 ntBASIC12□□□□□ -0.49
Vsx2Q61412 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vsx2Q61412 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Vsx2Q61412 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx2Q61412 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx2Q61412 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx2Q61412 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx2Q61412 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx2Q61412 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx2Q61412 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx2Q61412 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx2Q61412 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx2Q61412 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.99□□□□□ -0.49
Vsx2Q61412 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx2Q61412 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Vsx2Q61412 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.99□□□□□ -0.49
Vsx2Q61412 Gm2546-201ENSMUST00000182630 991 ntBASIC11.99□□□□□ -0.49
Vsx2Q61412 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.99□□□□□ -0.49
Vsx2Q61412 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.99□□□□□ -0.49
Vsx2Q61412 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.99□□□□□ -0.49
Vsx2Q61412 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx2Q61412 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Vsx2Q61412 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Vsx2Q61412 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Vsx2Q61412 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Vsx2Q61412 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx2Q61412 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx2Q61412 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx2Q61412 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx2Q61412 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Vsx2Q61412 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx2Q61412 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Vsx2Q61412 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx2Q61412 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx2Q61412 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx2Q61412 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx2Q61412 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Vsx2Q61412 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx2Q61412 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx2Q61412 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx2Q61412 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx2Q61412 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx2Q61412 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx2Q61412 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx2Q61412 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Vsx2Q61412 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Vsx2Q61412 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx2Q61412 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx2Q61412 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx2Q61412 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.98□□□□□ -0.49
Vsx2Q61412 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx2Q61412 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx2Q61412 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Vsx2Q61412 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.98□□□□□ -0.49
Vsx2Q61412 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx2Q61412 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx2Q61412 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx2Q61412 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx2Q61412 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx2Q61412 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx2Q61412 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx2Q61412 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.98□□□□□ -0.49
Vsx2Q61412 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx2Q61412 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx2Q61412 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx2Q61412 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.98□□□□□ -0.49
Vsx2Q61412 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.98□□□□□ -0.49
Vsx2Q61412 Gm38341-201ENSMUST00000195357 515 ntBASIC11.98□□□□□ -0.49
Vsx2Q61412 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Vsx2Q61412 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.98□□□□□ -0.49
Vsx2Q61412 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Vsx2Q61412 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx2Q61412 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx2Q61412 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.98□□□□□ -0.49
Vsx2Q61412 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx2Q61412 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.98□□□□□ -0.49
Vsx2Q61412 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx2Q61412 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx2Q61412 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx2Q61412 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx2Q61412 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Vsx2Q61412 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx2Q61412 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Vsx2Q61412 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx2Q61412 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx2Q61412 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx2Q61412 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx2Q61412 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Vsx2Q61412 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx2Q61412 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx2Q61412 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx2Q61412 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx2Q61412 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx2Q61412 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx2Q61412 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms