Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.38□□□□□ -0.43
Six4Q61321 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Six4Q61321 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Six4Q61321 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Six4Q61321 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.38□□□□□ -0.43
Six4Q61321 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Six4Q61321 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.37□□□□□ -0.43
Six4Q61321 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Six4Q61321 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.37□□□□□ -0.43
Six4Q61321 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Six4Q61321 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Six4Q61321 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Six4Q61321 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.37□□□□□ -0.43
Six4Q61321 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Six4Q61321 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Six4Q61321 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Six4Q61321 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Six4Q61321 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Six4Q61321 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Six4Q61321 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Six4Q61321 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Six4Q61321 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Six4Q61321 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Six4Q61321 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.37□□□□□ -0.43
Six4Q61321 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.37□□□□□ -0.43
Six4Q61321 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.37□□□□□ -0.43
Six4Q61321 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.37□□□□□ -0.43
Six4Q61321 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.37□□□□□ -0.43
Six4Q61321 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.37□□□□□ -0.43
Six4Q61321 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Six4Q61321 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
Six4Q61321 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Six4Q61321 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Six4Q61321 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.37□□□□□ -0.43
Six4Q61321 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.37□□□□□ -0.43
Six4Q61321 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Six4Q61321 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.37□□□□□ -0.43
Six4Q61321 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Six4Q61321 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Six4Q61321 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Six4Q61321 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Six4Q61321 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Six4Q61321 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Six4Q61321 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.37□□□□□ -0.43
Six4Q61321 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Six4Q61321 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Six4Q61321 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Six4Q61321 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.37□□□□□ -0.43
Six4Q61321 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Six4Q61321 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Six4Q61321 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Six4Q61321 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Six4Q61321 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.37□□□□□ -0.43
Six4Q61321 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Six4Q61321 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Six4Q61321 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Six4Q61321 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Six4Q61321 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Six4Q61321 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Six4Q61321 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.36□□□□□ -0.43
Six4Q61321 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Six4Q61321 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Six4Q61321 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Six4Q61321 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Six4Q61321 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.36□□□□□ -0.43
Six4Q61321 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Six4Q61321 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
Six4Q61321 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Six4Q61321 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Six4Q61321 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.36□□□□□ -0.43
Six4Q61321 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Six4Q61321 Gm15276-201ENSMUST00000145953 498 ntBASIC12.36□□□□□ -0.43
Six4Q61321 Gm26083-201ENSMUST00000157904 193 ntBASIC12.36□□□□□ -0.43
Six4Q61321 Gm25700-201ENSMUST00000177693 110 ntBASIC12.36□□□□□ -0.43
Six4Q61321 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Six4Q61321 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Six4Q61321 Gm13097-201ENSMUST00000210722 397 ntBASIC12.36□□□□□ -0.43
Six4Q61321 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Six4Q61321 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Six4Q61321 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Six4Q61321 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Six4Q61321 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Six4Q61321 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Six4Q61321 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Six4Q61321 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Six4Q61321 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Six4Q61321 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.36□□□□□ -0.43
Six4Q61321 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Six4Q61321 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Six4Q61321 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Six4Q61321 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Six4Q61321 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Six4Q61321 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Six4Q61321 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Six4Q61321 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Six4Q61321 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Six4Q61321 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.36□□□□□ -0.43
Six4Q61321 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Six4Q61321 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Six4Q61321 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms