Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col12a1Q60847 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.8□□□□□ -0.52
Col12a1Q60847 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Col12a1Q60847 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.8□□□□□ -0.52
Col12a1Q60847 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col12a1Q60847 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col12a1Q60847 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col12a1Q60847 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col12a1Q60847 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col12a1Q60847 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col12a1Q60847 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC11.8□□□□□ -0.52
Col12a1Q60847 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col12a1Q60847 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Col12a1Q60847 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col12a1Q60847 Gm12736-201ENSMUST00000119330 236 ntBASIC11.8□□□□□ -0.52
Col12a1Q60847 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC11.8□□□□□ -0.52
Col12a1Q60847 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC11.8□□□□□ -0.52
Col12a1Q60847 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col12a1Q60847 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col12a1Q60847 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col12a1Q60847 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col12a1Q60847 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Col12a1Q60847 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.8□□□□□ -0.52
Col12a1Q60847 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col12a1Q60847 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col12a1Q60847 Gm15519-201ENSMUST00000120088 1566 ntBASIC11.8□□□□□ -0.52
Col12a1Q60847 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.8□□□□□ -0.52
Col12a1Q60847 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Col12a1Q60847 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col12a1Q60847 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col12a1Q60847 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC11.8□□□□□ -0.52
Col12a1Q60847 Mir432-201ENSMUST00000157230 75 ntBASIC11.8□□□□□ -0.52
Col12a1Q60847 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Col12a1Q60847 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col12a1Q60847 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col12a1Q60847 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col12a1Q60847 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col12a1Q60847 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col12a1Q60847 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col12a1Q60847 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col12a1Q60847 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col12a1Q60847 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.79□□□□□ -0.52
Col12a1Q60847 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Col12a1Q60847 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC11.79□□□□□ -0.52
Col12a1Q60847 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col12a1Q60847 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Col12a1Q60847 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Col12a1Q60847 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col12a1Q60847 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col12a1Q60847 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Col12a1Q60847 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col12a1Q60847 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col12a1Q60847 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Col12a1Q60847 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Col12a1Q60847 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col12a1Q60847 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col12a1Q60847 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.79□□□□□ -0.52
Col12a1Q60847 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Col12a1Q60847 Gm43671-201ENSMUST00000200422 433 ntBASIC11.79□□□□□ -0.52
Col12a1Q60847 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col12a1Q60847 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.79□□□□□ -0.52
Col12a1Q60847 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col12a1Q60847 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Col12a1Q60847 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col12a1Q60847 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col12a1Q60847 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Col12a1Q60847 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.79□□□□□ -0.52
Col12a1Q60847 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col12a1Q60847 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Col12a1Q60847 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Col12a1Q60847 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col12a1Q60847 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col12a1Q60847 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC11.78□□□□□ -0.52
Col12a1Q60847 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col12a1Q60847 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.78□□□□□ -0.52
Col12a1Q60847 Gm6108-201ENSMUST00000208365 367 ntBASIC11.78□□□□□ -0.52
Col12a1Q60847 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.78□□□□□ -0.52
Col12a1Q60847 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC11.78□□□□□ -0.52
Col12a1Q60847 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col12a1Q60847 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.78□□□□□ -0.52
Col12a1Q60847 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.78□□□□□ -0.52
Col12a1Q60847 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col12a1Q60847 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col12a1Q60847 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC11.78□□□□□ -0.52
Col12a1Q60847 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.78□□□□□ -0.52
Col12a1Q60847 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Col12a1Q60847 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col12a1Q60847 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col12a1Q60847 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col12a1Q60847 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col12a1Q60847 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Col12a1Q60847 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col12a1Q60847 Gm14760-201ENSMUST00000121831 999 ntBASIC11.78□□□□□ -0.52
Col12a1Q60847 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col12a1Q60847 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col12a1Q60847 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col12a1Q60847 Gm43547-201ENSMUST00000197729 328 ntBASIC11.78□□□□□ -0.52
Col12a1Q60847 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC11.78□□□□□ -0.52
Col12a1Q60847 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC11.78□□□□□ -0.52
Col12a1Q60847 AC164099.1-201ENSMUST00000227780 333 ntBASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms