Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxd4Q60688 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Foxd4Q60688 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxd4Q60688 Gpr87-201ENSMUST00000056898 1080 ntBASIC13.04□□□□□ -0.32
Foxd4Q60688 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxd4Q60688 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxd4Q60688 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC13.04□□□□□ -0.32
Foxd4Q60688 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.04□□□□□ -0.32
Foxd4Q60688 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxd4Q60688 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxd4Q60688 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxd4Q60688 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxd4Q60688 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxd4Q60688 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.04□□□□□ -0.32
Foxd4Q60688 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxd4Q60688 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxd4Q60688 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxd4Q60688 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxd4Q60688 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxd4Q60688 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxd4Q60688 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Foxd4Q60688 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.03□□□□□ -0.32
Foxd4Q60688 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Foxd4Q60688 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxd4Q60688 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxd4Q60688 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxd4Q60688 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxd4Q60688 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxd4Q60688 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxd4Q60688 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.03□□□□□ -0.32
Foxd4Q60688 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxd4Q60688 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.03□□□□□ -0.32
Foxd4Q60688 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.03□□□□□ -0.32
Foxd4Q60688 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Foxd4Q60688 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxd4Q60688 Gm14350-201ENSMUST00000116642 640 ntBASIC13.03□□□□□ -0.32
Foxd4Q60688 Gm15741-201ENSMUST00000119401 754 ntBASIC13.03□□□□□ -0.32
Foxd4Q60688 Gm23884-201ENSMUST00000122687 294 ntBASIC13.03□□□□□ -0.32
Foxd4Q60688 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC13.03□□□□□ -0.32
Foxd4Q60688 Gm4207-201ENSMUST00000173144 960 ntBASIC13.03□□□□□ -0.32
Foxd4Q60688 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC13.03□□□□□ -0.32
Foxd4Q60688 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Foxd4Q60688 Gm38283-201ENSMUST00000193041 695 ntBASIC13.03□□□□□ -0.32
Foxd4Q60688 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.03□□□□□ -0.32
Foxd4Q60688 Lrp1b-212ENSMUST00000204204 798 ntTSL 2 BASIC13.03□□□□□ -0.32
Foxd4Q60688 Gm6983-201ENSMUST00000214912 628 ntBASIC13.03□□□□□ -0.32
Foxd4Q60688 Olfr125-201ENSMUST00000050255 1118 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Foxd4Q60688 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxd4Q60688 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxd4Q60688 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxd4Q60688 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Foxd4Q60688 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Foxd4Q60688 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxd4Q60688 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Foxd4Q60688 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxd4Q60688 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxd4Q60688 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Foxd4Q60688 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxd4Q60688 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxd4Q60688 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxd4Q60688 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Foxd4Q60688 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxd4Q60688 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxd4Q60688 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Foxd4Q60688 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxd4Q60688 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.03□□□□□ -0.32
Foxd4Q60688 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Foxd4Q60688 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Foxd4Q60688 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Foxd4Q60688 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Foxd4Q60688 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Foxd4Q60688 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Foxd4Q60688 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Foxd4Q60688 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Foxd4Q60688 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Foxd4Q60688 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.02□□□□□ -0.32
Foxd4Q60688 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.32
Foxd4Q60688 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Foxd4Q60688 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Foxd4Q60688 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.02□□□□□ -0.32
Foxd4Q60688 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Foxd4Q60688 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Foxd4Q60688 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Foxd4Q60688 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Foxd4Q60688 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Foxd4Q60688 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Foxd4Q60688 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Foxd4Q60688 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.02□□□□□ -0.33
Foxd4Q60688 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Foxd4Q60688 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Foxd4Q60688 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Foxd4Q60688 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Foxd4Q60688 Gm28011-201ENSMUST00000184097 175 ntBASIC13.02□□□□□ -0.33
Foxd4Q60688 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Foxd4Q60688 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.02□□□□□ -0.33
Foxd4Q60688 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.02□□□□□ -0.33
Foxd4Q60688 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC13.02□□□□□ -0.33
Foxd4Q60688 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.02□□□□□ -0.33
Foxd4Q60688 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.02□□□□□ -0.33
Foxd4Q60688 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms