Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Shroom1Q5SX79 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.09□□□□□ -0.31
Shroom1Q5SX79 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shroom1Q5SX79 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Shroom1Q5SX79 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.09□□□□□ -0.31
Shroom1Q5SX79 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.31
Shroom1Q5SX79 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Shroom1Q5SX79 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Shroom1Q5SX79 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Shroom1Q5SX79 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Shroom1Q5SX79 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
Shroom1Q5SX79 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shroom1Q5SX79 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Shroom1Q5SX79 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.08□□□□□ -0.32
Shroom1Q5SX79 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Shroom1Q5SX79 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shroom1Q5SX79 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.08□□□□□ -0.32
Shroom1Q5SX79 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Shroom1Q5SX79 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Shroom1Q5SX79 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shroom1Q5SX79 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Shroom1Q5SX79 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shroom1Q5SX79 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC13.08□□□□□ -0.32
Shroom1Q5SX79 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Shroom1Q5SX79 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Shroom1Q5SX79 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Shroom1Q5SX79 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Shroom1Q5SX79 Gm27552-201ENSMUST00000183351 62 ntBASIC13.08□□□□□ -0.32
Shroom1Q5SX79 Gm27844-201ENSMUST00000183613 62 ntBASIC13.08□□□□□ -0.32
Shroom1Q5SX79 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Shroom1Q5SX79 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Shroom1Q5SX79 AC131330.1-201ENSMUST00000227814 1015 ntBASIC13.08□□□□□ -0.32
Shroom1Q5SX79 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shroom1Q5SX79 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Shroom1Q5SX79 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Shroom1Q5SX79 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Shroom1Q5SX79 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shroom1Q5SX79 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Shroom1Q5SX79 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shroom1Q5SX79 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Shroom1Q5SX79 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Shroom1Q5SX79 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shroom1Q5SX79 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shroom1Q5SX79 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Shroom1Q5SX79 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shroom1Q5SX79 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.07□□□□□ -0.32
Shroom1Q5SX79 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shroom1Q5SX79 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.07□□□□□ -0.32
Shroom1Q5SX79 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shroom1Q5SX79 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shroom1Q5SX79 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Shroom1Q5SX79 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shroom1Q5SX79 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shroom1Q5SX79 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shroom1Q5SX79 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shroom1Q5SX79 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC13.07□□□□□ -0.32
Shroom1Q5SX79 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.07□□□□□ -0.32
Shroom1Q5SX79 Gm18304-201ENSMUST00000189162 546 ntBASIC13.07□□□□□ -0.32
Shroom1Q5SX79 Gm42937-201ENSMUST00000197360 752 ntBASIC13.07□□□□□ -0.32
Shroom1Q5SX79 AY036118-201ENSMUST00000200021 923 ntBASIC13.07□□□□□ -0.32
Shroom1Q5SX79 Gm42997-202ENSMUST00000200321 985 ntBASIC13.07□□□□□ -0.32
Shroom1Q5SX79 Gm19994-201ENSMUST00000217086 586 ntBASIC13.07□□□□□ -0.32
Shroom1Q5SX79 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Shroom1Q5SX79 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shroom1Q5SX79 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shroom1Q5SX79 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shroom1Q5SX79 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shroom1Q5SX79 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shroom1Q5SX79 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shroom1Q5SX79 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Shroom1Q5SX79 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shroom1Q5SX79 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shroom1Q5SX79 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shroom1Q5SX79 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shroom1Q5SX79 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shroom1Q5SX79 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Shroom1Q5SX79 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC13.07□□□□□ -0.32
Shroom1Q5SX79 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Shroom1Q5SX79 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shroom1Q5SX79 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shroom1Q5SX79 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Shroom1Q5SX79 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.06□□□□□ -0.32
Shroom1Q5SX79 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Shroom1Q5SX79 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Shroom1Q5SX79 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Shroom1Q5SX79 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Shroom1Q5SX79 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Shroom1Q5SX79 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.06□□□□□ -0.32
Shroom1Q5SX79 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shroom1Q5SX79 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.06□□□□□ -0.32
Shroom1Q5SX79 Gm14263-201ENSMUST00000117955 746 ntBASIC13.06□□□□□ -0.32
Shroom1Q5SX79 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.06□□□□□ -0.32
Shroom1Q5SX79 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.06□□□□□ -0.32
Shroom1Q5SX79 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC13.06□□□□□ -0.32
Shroom1Q5SX79 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC13.06□□□□□ -0.32
Shroom1Q5SX79 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Shroom1Q5SX79 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC13.06□□□□□ -0.32
Shroom1Q5SX79 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shroom1Q5SX79 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shroom1Q5SX79 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms