Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Vps54Q5SPW0 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Vps54Q5SPW0 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vps54Q5SPW0 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Vps54Q5SPW0 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC14.72□□□□□ -0.05
Vps54Q5SPW0 Gm14017-201ENSMUST00000121934 386 ntBASIC14.72□□□□□ -0.05
Vps54Q5SPW0 Gm24749-201ENSMUST00000157838 343 ntBASIC14.72□□□□□ -0.05
Vps54Q5SPW0 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC14.72□□□□□ -0.05
Vps54Q5SPW0 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC14.72□□□□□ -0.05
Vps54Q5SPW0 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vps54Q5SPW0 Gm37666-201ENSMUST00000194110 866 ntBASIC14.72□□□□□ -0.05
Vps54Q5SPW0 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC14.72□□□□□ -0.05
Vps54Q5SPW0 Gm17812-201ENSMUST00000204935 318 ntBASIC14.72□□□□□ -0.05
Vps54Q5SPW0 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC14.72□□□□□ -0.05
Vps54Q5SPW0 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC14.72□□□□□ -0.05
Vps54Q5SPW0 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps54Q5SPW0 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps54Q5SPW0 CT009757.3-201ENSMUST00000223367 2320 ntBASIC14.72□□□□□ -0.05
Vps54Q5SPW0 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps54Q5SPW0 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps54Q5SPW0 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vps54Q5SPW0 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps54Q5SPW0 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps54Q5SPW0 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC14.72□□□□□ -0.05
Vps54Q5SPW0 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vps54Q5SPW0 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Vps54Q5SPW0 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps54Q5SPW0 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps54Q5SPW0 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
Vps54Q5SPW0 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC14.71□□□□□ -0.05
Vps54Q5SPW0 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps54Q5SPW0 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps54Q5SPW0 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps54Q5SPW0 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Vps54Q5SPW0 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Vps54Q5SPW0 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps54Q5SPW0 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps54Q5SPW0 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Vps54Q5SPW0 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps54Q5SPW0 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Vps54Q5SPW0 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps54Q5SPW0 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps54Q5SPW0 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps54Q5SPW0 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Vps54Q5SPW0 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps54Q5SPW0 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Vps54Q5SPW0 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Vps54Q5SPW0 Gm12164-201ENSMUST00000121695 551 ntBASIC14.71□□□□□ -0.05
Vps54Q5SPW0 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Vps54Q5SPW0 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC14.71□□□□□ -0.05
Vps54Q5SPW0 Gm24990-201ENSMUST00000157406 323 ntBASIC14.71□□□□□ -0.05
Vps54Q5SPW0 Gm27341-201ENSMUST00000183570 106 ntBASIC14.71□□□□□ -0.05
Vps54Q5SPW0 Gstp-ps-201ENSMUST00000195526 631 ntBASIC14.71□□□□□ -0.05
Vps54Q5SPW0 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC14.71□□□□□ -0.05
Vps54Q5SPW0 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Vps54Q5SPW0 CT485787.1-201ENSMUST00000225617 968 ntBASIC14.71□□□□□ -0.05
Vps54Q5SPW0 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps54Q5SPW0 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Vps54Q5SPW0 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC14.71□□□□□ -0.05
Vps54Q5SPW0 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps54Q5SPW0 AC123619.2-202ENSMUST00000225097 1568 ntBASIC14.71□□□□□ -0.05
Vps54Q5SPW0 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Vps54Q5SPW0 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps54Q5SPW0 Gm14132-201ENSMUST00000117188 1719 ntBASIC14.71□□□□□ -0.05
Vps54Q5SPW0 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC14.71□□□□□ -0.06
Vps54Q5SPW0 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Vps54Q5SPW0 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps54Q5SPW0 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC14.7□□□□□ -0.06
Vps54Q5SPW0 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Vps54Q5SPW0 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps54Q5SPW0 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps54Q5SPW0 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps54Q5SPW0 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Vps54Q5SPW0 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Vps54Q5SPW0 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps54Q5SPW0 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps54Q5SPW0 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps54Q5SPW0 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps54Q5SPW0 Gm37131-201ENSMUST00000192502 1561 ntBASIC14.7□□□□□ -0.06
Vps54Q5SPW0 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Vps54Q5SPW0 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps54Q5SPW0 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps54Q5SPW0 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC14.7□□□□□ -0.06
Vps54Q5SPW0 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
Vps54Q5SPW0 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Vps54Q5SPW0 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps54Q5SPW0 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC14.7□□□□□ -0.06
Vps54Q5SPW0 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC14.7□□□□□ -0.06
Vps54Q5SPW0 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC14.7□□□□□ -0.06
Vps54Q5SPW0 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC14.7□□□□□ -0.06
Vps54Q5SPW0 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC14.7□□□□□ -0.06
Vps54Q5SPW0 Gm45433-201ENSMUST00000209386 247 ntBASIC14.7□□□□□ -0.06
Vps54Q5SPW0 Gm45484-201ENSMUST00000210310 1141 ntBASIC14.7□□□□□ -0.06
Vps54Q5SPW0 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC14.7□□□□□ -0.06
Vps54Q5SPW0 Aprt-ps-201ENSMUST00000212311 505 ntBASIC14.7□□□□□ -0.06
Vps54Q5SPW0 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC14.7□□□□□ -0.06
Vps54Q5SPW0 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Vps54Q5SPW0 Gm43463-201ENSMUST00000195967 1803 ntBASIC14.7□□□□□ -0.06
Vps54Q5SPW0 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Vps54Q5SPW0 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms