Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccdc88aQ5SNZ0 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc88aQ5SNZ0 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc88aQ5SNZ0 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc88aQ5SNZ0 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc88aQ5SNZ0 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC14.01□□□□□ -0.17
Ccdc88aQ5SNZ0 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc88aQ5SNZ0 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Ccdc88aQ5SNZ0 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc88aQ5SNZ0 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ccdc88aQ5SNZ0 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc88aQ5SNZ0 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC14□□□□□ -0.17
Ccdc88aQ5SNZ0 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc88aQ5SNZ0 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm11511-201ENSMUST00000118146 540 ntBASIC14□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm15725-201ENSMUST00000119947 1090 ntBASIC14□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm23085-201ENSMUST00000157849 293 ntBASIC14□□□□□ -0.17
Ccdc88aQ5SNZ0 Ighv4-2-201ENSMUST00000192975 362 ntBASIC14□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm43520-201ENSMUST00000197996 164 ntBASIC14□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC14□□□□□ -0.17
Ccdc88aQ5SNZ0 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc88aQ5SNZ0 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc88aQ5SNZ0 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Ccdc88aQ5SNZ0 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm43463-201ENSMUST00000195967 1803 ntBASIC14□□□□□ -0.17
Ccdc88aQ5SNZ0 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ccdc88aQ5SNZ0 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ccdc88aQ5SNZ0 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc88aQ5SNZ0 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc88aQ5SNZ0 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc88aQ5SNZ0 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc88aQ5SNZ0 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc88aQ5SNZ0 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc88aQ5SNZ0 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc88aQ5SNZ0 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc88aQ5SNZ0 Map1b-203ENSMUST00000223725 2669 ntBASIC14□□□□□ -0.17
Ccdc88aQ5SNZ0 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc88aQ5SNZ0 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm16166-201ENSMUST00000118291 787 ntBASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm7722-201ENSMUST00000120646 741 ntBASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm14247-201ENSMUST00000120950 237 ntBASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm12628-201ENSMUST00000122193 382 ntBASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm6867-201ENSMUST00000219165 425 ntBASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 AC154290.1-201ENSMUST00000223786 1240 ntBASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm9785-201ENSMUST00000062642 1006 ntBASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm5621-201ENSMUST00000187303 640 ntBASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.99□□□□□ -0.17
Ccdc88aQ5SNZ0 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc88aQ5SNZ0 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc88aQ5SNZ0 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms