Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 Gm44344-201ENSMUST00000200287 129 ntBASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 Gm3695-201ENSMUST00000087222 1009 ntBASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 Gm43273-201ENSMUST00000199649 2594 ntBASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 AC125374.1-201ENSMUST00000213573 1400 ntBASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Trav3-3Q5R1C3 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
Trav3-3Q5R1C3 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav3-3Q5R1C3 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
Trav3-3Q5R1C3 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Trav3-3Q5R1C3 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC9.21□□□□□ -0.93
Trav3-3Q5R1C3 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
Trav3-3Q5R1C3 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Trav3-3Q5R1C3 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav3-3Q5R1C3 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav3-3Q5R1C3 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC9.21□□□□□ -0.93
Trav3-3Q5R1C3 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
Trav3-3Q5R1C3 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav3-3Q5R1C3 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
Trav3-3Q5R1C3 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav3-3Q5R1C3 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav3-3Q5R1C3 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Trav3-3Q5R1C3 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
Trav3-3Q5R1C3 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.94
Trav3-3Q5R1C3 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC9.21□□□□□ -0.94
Trav3-3Q5R1C3 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC9.21□□□□□ -0.94
Trav3-3Q5R1C3 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC9.21□□□□□ -0.94
Trav3-3Q5R1C3 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trav3-3Q5R1C3 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC9.21□□□□□ -0.94
Trav3-3Q5R1C3 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC9.21□□□□□ -0.94
Trav3-3Q5R1C3 Gm27321-201ENSMUST00000185021 205 ntBASIC9.21□□□□□ -0.94
Trav3-3Q5R1C3 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC9.21□□□□□ -0.94
Trav3-3Q5R1C3 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trav3-3Q5R1C3 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav3-3Q5R1C3 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trav3-3Q5R1C3 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav3-3Q5R1C3 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav3-3Q5R1C3 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav3-3Q5R1C3 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav3-3Q5R1C3 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav3-3Q5R1C3 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav3-3Q5R1C3 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav3-3Q5R1C3 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Trav3-3Q5R1C3 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav3-3Q5R1C3 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC9.21□□□□□ -0.94
Trav3-3Q5R1C3 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC9.21□□□□□ -0.94
Trav3-3Q5R1C3 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trav3-3Q5R1C3 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav3-3Q5R1C3 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav3-3Q5R1C3 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav3-3Q5R1C3 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav3-3Q5R1C3 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav3-3Q5R1C3 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Trav3-3Q5R1C3 AC124751.1-201ENSMUST00000222716 1408 ntBASIC9.21□□□□□ -0.94
Trav3-3Q5R1C3 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC9.21□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms