Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Urb1Q571H0 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Urb1Q571H0 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Urb1Q571H0 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Urb1Q571H0 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Urb1Q571H0 Gm10731-201ENSMUST00000181171 448 ntBASIC11.33□□□□□ -0.6
Urb1Q571H0 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC11.33□□□□□ -0.6
Urb1Q571H0 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC11.33□□□□□ -0.6
Urb1Q571H0 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC11.33□□□□□ -0.6
Urb1Q571H0 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.33□□□□□ -0.6
Urb1Q571H0 Ginm1-202ENSMUST00000065124 300 ntBASIC11.33□□□□□ -0.6
Urb1Q571H0 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC11.33□□□□□ -0.6
Urb1Q571H0 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Urb1Q571H0 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Urb1Q571H0 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Urb1Q571H0 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Urb1Q571H0 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Urb1Q571H0 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Urb1Q571H0 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Urb1Q571H0 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Urb1Q571H0 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Urb1Q571H0 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Urb1Q571H0 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Urb1Q571H0 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.32□□□□□ -0.6
Urb1Q571H0 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Urb1Q571H0 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Urb1Q571H0 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Urb1Q571H0 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Urb1Q571H0 Gm25880-201ENSMUST00000104331 132 ntBASIC11.32□□□□□ -0.6
Urb1Q571H0 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.32□□□□□ -0.6
Urb1Q571H0 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC11.32□□□□□ -0.6
Urb1Q571H0 Gm12857-201ENSMUST00000117678 592 ntBASIC11.32□□□□□ -0.6
Urb1Q571H0 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.32□□□□□ -0.6
Urb1Q571H0 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Urb1Q571H0 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Urb1Q571H0 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.32□□□□□ -0.6
Urb1Q571H0 Gm19166-201ENSMUST00000196041 1063 ntBASIC11.32□□□□□ -0.6
Urb1Q571H0 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC11.32□□□□□ -0.6
Urb1Q571H0 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Urb1Q571H0 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Urb1Q571H0 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Urb1Q571H0 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.32□□□□□ -0.6
Urb1Q571H0 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.32□□□□□ -0.6
Urb1Q571H0 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Urb1Q571H0 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Urb1Q571H0 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Urb1Q571H0 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Urb1Q571H0 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Urb1Q571H0 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.32□□□□□ -0.6
Urb1Q571H0 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Urb1Q571H0 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Urb1Q571H0 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Urb1Q571H0 Gm20392-201ENSMUST00000173047 701 ntBASIC11.32□□□□□ -0.6
Urb1Q571H0 Gm28882-201ENSMUST00000185504 314 ntBASIC11.32□□□□□ -0.6
Urb1Q571H0 Gm3793-201ENSMUST00000204973 672 ntBASIC11.32□□□□□ -0.6
Urb1Q571H0 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Urb1Q571H0 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Urb1Q571H0 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.32□□□□□ -0.6
Urb1Q571H0 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Urb1Q571H0 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Urb1Q571H0 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Urb1Q571H0 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Urb1Q571H0 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Urb1Q571H0 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Urb1Q571H0 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Urb1Q571H0 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Urb1Q571H0 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Urb1Q571H0 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Urb1Q571H0 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Urb1Q571H0 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.31□□□□□ -0.6
Urb1Q571H0 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Urb1Q571H0 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC11.31□□□□□ -0.6
Urb1Q571H0 Mir7221-201ENSMUST00000184009 72 ntBASIC11.31□□□□□ -0.6
Urb1Q571H0 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Urb1Q571H0 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Urb1Q571H0 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Urb1Q571H0 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Urb1Q571H0 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Urb1Q571H0 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Urb1Q571H0 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Urb1Q571H0 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Urb1Q571H0 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Urb1Q571H0 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Urb1Q571H0 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Urb1Q571H0 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Urb1Q571H0 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Urb1Q571H0 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Urb1Q571H0 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Urb1Q571H0 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Urb1Q571H0 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Urb1Q571H0 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Urb1Q571H0 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Urb1Q571H0 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.31□□□□□ -0.6
Urb1Q571H0 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Urb1Q571H0 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.31□□□□□ -0.6
Urb1Q571H0 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.31□□□□□ -0.6
Urb1Q571H0 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Urb1Q571H0 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Urb1Q571H0 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Urb1Q571H0 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms