Protein–RNA interactions for Protein: Q3U898

Cops9, COP9 signalosome complex subunit 9, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops9Q3U898 Gm16372-201ENSMUST00000073088 450 ntBASIC8.38□□□□□ -1.07
Cops9Q3U898 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC8.38□□□□□ -1.07
Cops9Q3U898 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cops9Q3U898 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cops9Q3U898 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC8.38□□□□□ -1.07
Cops9Q3U898 Sorcs1-208ENSMUST00000211687 7080 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cops9Q3U898 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cops9Q3U898 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cops9Q3U898 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Cops9Q3U898 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cops9Q3U898 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC8.38□□□□□ -1.07
Cops9Q3U898 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Cops9Q3U898 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cops9Q3U898 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cops9Q3U898 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cops9Q3U898 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC8.37□□□□□ -1.07
Cops9Q3U898 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cops9Q3U898 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cops9Q3U898 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cops9Q3U898 Pcdh15-231ENSMUST00000177107 5696 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Cops9Q3U898 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cops9Q3U898 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Cops9Q3U898 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cops9Q3U898 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cops9Q3U898 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC8.37□□□□□ -1.07
Cops9Q3U898 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cops9Q3U898 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cops9Q3U898 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cops9Q3U898 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
Cops9Q3U898 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cops9Q3U898 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cops9Q3U898 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cops9Q3U898 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cops9Q3U898 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cops9Q3U898 Gm16202-201ENSMUST00000117532 544 ntBASIC8.37□□□□□ -1.07
Cops9Q3U898 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC8.37□□□□□ -1.07
Cops9Q3U898 Gm11745-201ENSMUST00000121669 448 ntBASIC8.37□□□□□ -1.07
Cops9Q3U898 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC8.37□□□□□ -1.07
Cops9Q3U898 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cops9Q3U898 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC8.37□□□□□ -1.07
Cops9Q3U898 Gm25144-201ENSMUST00000179561 110 ntBASIC8.37□□□□□ -1.07
Cops9Q3U898 Gm25352-201ENSMUST00000179815 110 ntBASIC8.37□□□□□ -1.07
Cops9Q3U898 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cops9Q3U898 Mir339-201ENSMUST00000083659 96 ntBASIC8.37□□□□□ -1.07
Cops9Q3U898 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Cops9Q3U898 Mtor-202ENSMUST00000103221 8564 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cops9Q3U898 Lama3-201ENSMUST00000092070 10548 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Cops9Q3U898 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cops9Q3U898 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cops9Q3U898 AC160405.1-201ENSMUST00000218207 1545 ntBASIC8.37□□□□□ -1.07
Cops9Q3U898 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Cops9Q3U898 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cops9Q3U898 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cops9Q3U898 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cops9Q3U898 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Cops9Q3U898 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC8.37□□□□□ -1.07
Cops9Q3U898 Ctnnd1-211ENSMUST00000111685 5985 ntTSL 5 BASIC8.37□□□□□ -1.07
Cops9Q3U898 Ctnnd1-215ENSMUST00000111689 5961 ntTSL 5 BASIC8.37□□□□□ -1.07
Cops9Q3U898 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cops9Q3U898 4932431P20Rik-202ENSMUST00000141713 9288 ntBASIC8.37□□□□□ -1.07
Cops9Q3U898 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cops9Q3U898 Gm37084-201ENSMUST00000191688 5898 ntBASIC8.37□□□□□ -1.07
Cops9Q3U898 Dock4-204ENSMUST00000220912 7360 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cops9Q3U898 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cops9Q3U898 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Cops9Q3U898 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cops9Q3U898 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cops9Q3U898 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cops9Q3U898 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cops9Q3U898 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Cops9Q3U898 Fbxo32-201ENSMUST00000022986 6976 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cops9Q3U898 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Cops9Q3U898 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Cops9Q3U898 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Cops9Q3U898 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cops9Q3U898 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Cops9Q3U898 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cops9Q3U898 Gm42913-201ENSMUST00000197936 1853 ntBASIC8.36□□□□□ -1.07
Cops9Q3U898 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
Cops9Q3U898 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Cops9Q3U898 Baz2a-203ENSMUST00000217851 8385 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Cops9Q3U898 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cops9Q3U898 Umodl1-203ENSMUST00000114555 5041 ntAPPRIS P2 TSL 5 BASIC8.36□□□□□ -1.07
Cops9Q3U898 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Cops9Q3U898 Serpinc1-201ENSMUST00000064725 4970 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cops9Q3U898 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cops9Q3U898 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cops9Q3U898 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cops9Q3U898 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC8.36□□□□□ -1.07
Cops9Q3U898 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cops9Q3U898 Gm10110-202ENSMUST00000228705 3220 ntBASIC8.36□□□□□ -1.07
Cops9Q3U898 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cops9Q3U898 Enah-211ENSMUST00000193703 11229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cops9Q3U898 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cops9Q3U898 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC8.36□□□□□ -1.07
Cops9Q3U898 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cops9Q3U898 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Cops9Q3U898 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Cops9Q3U898 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC8.36□□□□□ -1.07
Cops9Q3U898 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC8.36□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms