Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col19a1Q0VF58 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col19a1Q0VF58 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col19a1Q0VF58 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col19a1Q0VF58 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.03□□□□□ -0.32
Col19a1Q0VF58 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.03□□□□□ -0.32
Col19a1Q0VF58 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Col19a1Q0VF58 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col19a1Q0VF58 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col19a1Q0VF58 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC13.03□□□□□ -0.32
Col19a1Q0VF58 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col19a1Q0VF58 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col19a1Q0VF58 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col19a1Q0VF58 Mir6941-201ENSMUST00000184711 59 ntBASIC13.03□□□□□ -0.32
Col19a1Q0VF58 Gm42511-201ENSMUST00000196160 234 ntBASIC13.03□□□□□ -0.32
Col19a1Q0VF58 Gm43852-201ENSMUST00000202098 917 ntBASIC13.03□□□□□ -0.32
Col19a1Q0VF58 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col19a1Q0VF58 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC13.03□□□□□ -0.32
Col19a1Q0VF58 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col19a1Q0VF58 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col19a1Q0VF58 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
Col19a1Q0VF58 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col19a1Q0VF58 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Col19a1Q0VF58 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.03□□□□□ -0.32
Col19a1Q0VF58 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.02□□□□□ -0.32
Col19a1Q0VF58 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col19a1Q0VF58 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col19a1Q0VF58 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Col19a1Q0VF58 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col19a1Q0VF58 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.02□□□□□ -0.32
Col19a1Q0VF58 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col19a1Q0VF58 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.02□□□□□ -0.32
Col19a1Q0VF58 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.02□□□□□ -0.32
Col19a1Q0VF58 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col19a1Q0VF58 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC13.02□□□□□ -0.33
Col19a1Q0VF58 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col19a1Q0VF58 Gm12712-201ENSMUST00000120676 801 ntBASIC13.02□□□□□ -0.33
Col19a1Q0VF58 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col19a1Q0VF58 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col19a1Q0VF58 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col19a1Q0VF58 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col19a1Q0VF58 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col19a1Q0VF58 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col19a1Q0VF58 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Col19a1Q0VF58 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC13.02□□□□□ -0.33
Col19a1Q0VF58 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col19a1Q0VF58 Olfr692-202ENSMUST00000217827 1126 ntBASIC13.02□□□□□ -0.33
Col19a1Q0VF58 BC106175-202ENSMUST00000219344 1213 ntBASIC13.02□□□□□ -0.33
Col19a1Q0VF58 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Col19a1Q0VF58 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col19a1Q0VF58 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Col19a1Q0VF58 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col19a1Q0VF58 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Col19a1Q0VF58 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col19a1Q0VF58 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col19a1Q0VF58 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col19a1Q0VF58 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col19a1Q0VF58 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col19a1Q0VF58 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col19a1Q0VF58 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col19a1Q0VF58 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Col19a1Q0VF58 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col19a1Q0VF58 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Col19a1Q0VF58 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col19a1Q0VF58 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col19a1Q0VF58 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Col19a1Q0VF58 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col19a1Q0VF58 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Col19a1Q0VF58 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col19a1Q0VF58 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col19a1Q0VF58 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col19a1Q0VF58 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Col19a1Q0VF58 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Col19a1Q0VF58 Gm22594-201ENSMUST00000104251 130 ntBASIC13.01□□□□□ -0.33
Col19a1Q0VF58 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Col19a1Q0VF58 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col19a1Q0VF58 Gm11660-201ENSMUST00000120955 412 ntBASIC13.01□□□□□ -0.33
Col19a1Q0VF58 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Col19a1Q0VF58 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC13.01□□□□□ -0.33
Col19a1Q0VF58 Gm24248-201ENSMUST00000157321 322 ntBASIC13.01□□□□□ -0.33
Col19a1Q0VF58 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC13.01□□□□□ -0.33
Col19a1Q0VF58 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col19a1Q0VF58 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Col19a1Q0VF58 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC13.01□□□□□ -0.33
Col19a1Q0VF58 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC13.01□□□□□ -0.33
Col19a1Q0VF58 Gm37852-201ENSMUST00000193027 350 ntBASIC13.01□□□□□ -0.33
Col19a1Q0VF58 Gm37981-201ENSMUST00000194280 535 ntBASIC13.01□□□□□ -0.33
Col19a1Q0VF58 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col19a1Q0VF58 Gm18561-201ENSMUST00000206027 804 ntBASIC13.01□□□□□ -0.33
Col19a1Q0VF58 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col19a1Q0VF58 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC13.01□□□□□ -0.33
Col19a1Q0VF58 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC13.01□□□□□ -0.33
Col19a1Q0VF58 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC13.01□□□□□ -0.33
Col19a1Q0VF58 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC13.01□□□□□ -0.33
Col19a1Q0VF58 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col19a1Q0VF58 Gm43334-201ENSMUST00000197740 1318 ntBASIC13.01□□□□□ -0.33
Col19a1Q0VF58 Gm18782-201ENSMUST00000209023 1399 ntBASIC13.01□□□□□ -0.33
Col19a1Q0VF58 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Col19a1Q0VF58 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Col19a1Q0VF58 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms