Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Gm18893-201ENSMUST00000198416 943 ntBASIC13.28□□□□□ -0.28
Col9a2Q07643 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a2Q07643 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a2Q07643 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC13.28□□□□□ -0.28
Col9a2Q07643 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a2Q07643 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Col9a2Q07643 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a2Q07643 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a2Q07643 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.28□□□□□ -0.28
Col9a2Q07643 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Col9a2Q07643 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
Col9a2Q07643 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a2Q07643 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Col9a2Q07643 Gm9072-201ENSMUST00000218390 1514 ntBASIC13.28□□□□□ -0.28
Col9a2Q07643 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.28□□□□□ -0.28
Col9a2Q07643 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a2Q07643 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.28□□□□□ -0.28
Col9a2Q07643 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Col9a2Q07643 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Col9a2Q07643 Gm37348-201ENSMUST00000193104 1789 ntBASIC13.27□□□□□ -0.28
Col9a2Q07643 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.28
Col9a2Q07643 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Col9a2Q07643 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Col9a2Q07643 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Col9a2Q07643 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col9a2Q07643 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col9a2Q07643 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col9a2Q07643 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col9a2Q07643 Gm13035-201ENSMUST00000117496 342 ntBASIC13.27□□□□□ -0.29
Col9a2Q07643 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Col9a2Q07643 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC13.27□□□□□ -0.29
Col9a2Q07643 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.27□□□□□ -0.29
Col9a2Q07643 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col9a2Q07643 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col9a2Q07643 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col9a2Q07643 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col9a2Q07643 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.29
Col9a2Q07643 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col9a2Q07643 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col9a2Q07643 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Col9a2Q07643 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.27□□□□□ -0.29
Col9a2Q07643 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col9a2Q07643 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Col9a2Q07643 AC173482.6-201ENSMUST00000225889 1741 ntBASIC13.27□□□□□ -0.29
Col9a2Q07643 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Col9a2Q07643 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col9a2Q07643 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col9a2Q07643 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col9a2Q07643 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col9a2Q07643 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col9a2Q07643 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col9a2Q07643 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Col9a2Q07643 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col9a2Q07643 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Col9a2Q07643 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC13.26□□□□□ -0.29
Col9a2Q07643 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Col9a2Q07643 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC13.26□□□□□ -0.29
Col9a2Q07643 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col9a2Q07643 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC13.26□□□□□ -0.29
Col9a2Q07643 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.26□□□□□ -0.29
Col9a2Q07643 Gm25881-201ENSMUST00000157783 103 ntBASIC13.26□□□□□ -0.29
Col9a2Q07643 Mir1943-201ENSMUST00000158276 73 ntBASIC13.26□□□□□ -0.29
Col9a2Q07643 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col9a2Q07643 H2-Q3-201ENSMUST00000172583 608 ntBASIC13.26□□□□□ -0.29
Col9a2Q07643 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col9a2Q07643 Gm27438-201ENSMUST00000183480 110 ntBASIC13.26□□□□□ -0.29
Col9a2Q07643 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Col9a2Q07643 Gm3332-201ENSMUST00000189337 928 ntBASIC13.26□□□□□ -0.29
Col9a2Q07643 Gm10152-201ENSMUST00000193475 1344 ntBASIC13.26□□□□□ -0.29
Col9a2Q07643 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col9a2Q07643 CT571245.2-201ENSMUST00000218421 305 ntBASIC13.26□□□□□ -0.29
Col9a2Q07643 Spcs1-203ENSMUST00000226374 592 ntBASIC13.26□□□□□ -0.29
Col9a2Q07643 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col9a2Q07643 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col9a2Q07643 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col9a2Q07643 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col9a2Q07643 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col9a2Q07643 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Col9a2Q07643 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col9a2Q07643 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col9a2Q07643 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col9a2Q07643 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Col9a2Q07643 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.26□□□□□ -0.29
Col9a2Q07643 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col9a2Q07643 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.26□□□□□ -0.29
Col9a2Q07643 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col9a2Q07643 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col9a2Q07643 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col9a2Q07643 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col9a2Q07643 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Col9a2Q07643 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Col9a2Q07643 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col9a2Q07643 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col9a2Q07643 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Col9a2Q07643 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col9a2Q07643 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Col9a2Q07643 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col9a2Q07643 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC13.25□□□□□ -0.29
Col9a2Q07643 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Col9a2Q07643 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms