Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Msx2Q03358 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Msx2Q03358 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Msx2Q03358 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Msx2Q03358 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msx2Q03358 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.9□□□□□ -0.5
Msx2Q03358 Gm37917-201ENSMUST00000194711 392 ntBASIC11.9□□□□□ -0.5
Msx2Q03358 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC11.9□□□□□ -0.5
Msx2Q03358 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Msx2Q03358 Gm18624-201ENSMUST00000220966 658 ntBASIC11.9□□□□□ -0.5
Msx2Q03358 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msx2Q03358 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msx2Q03358 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC11.9□□□□□ -0.5
Msx2Q03358 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.9□□□□□ -0.5
Msx2Q03358 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msx2Q03358 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msx2Q03358 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msx2Q03358 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msx2Q03358 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msx2Q03358 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msx2Q03358 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msx2Q03358 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.51
Msx2Q03358 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.9□□□□□ -0.51
Msx2Q03358 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Msx2Q03358 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Msx2Q03358 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Msx2Q03358 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Msx2Q03358 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Msx2Q03358 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Msx2Q03358 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msx2Q03358 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msx2Q03358 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msx2Q03358 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.89□□□□□ -0.51
Msx2Q03358 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msx2Q03358 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Msx2Q03358 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msx2Q03358 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Msx2Q03358 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Msx2Q03358 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msx2Q03358 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Msx2Q03358 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.89□□□□□ -0.51
Msx2Q03358 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Msx2Q03358 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msx2Q03358 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.89□□□□□ -0.51
Msx2Q03358 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msx2Q03358 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Msx2Q03358 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Msx2Q03358 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Msx2Q03358 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msx2Q03358 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.89□□□□□ -0.51
Msx2Q03358 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Msx2Q03358 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.89□□□□□ -0.51
Msx2Q03358 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Msx2Q03358 Gm9022-201ENSMUST00000182482 992 ntBASIC11.89□□□□□ -0.51
Msx2Q03358 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.89□□□□□ -0.51
Msx2Q03358 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.89□□□□□ -0.51
Msx2Q03358 Gm8099-201ENSMUST00000200510 742 ntBASIC11.89□□□□□ -0.51
Msx2Q03358 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Msx2Q03358 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.89□□□□□ -0.51
Msx2Q03358 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.89□□□□□ -0.51
Msx2Q03358 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msx2Q03358 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msx2Q03358 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msx2Q03358 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msx2Q03358 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Msx2Q03358 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.89□□□□□ -0.51
Msx2Q03358 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.89□□□□□ -0.51
Msx2Q03358 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msx2Q03358 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msx2Q03358 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Msx2Q03358 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msx2Q03358 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msx2Q03358 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msx2Q03358 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Msx2Q03358 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msx2Q03358 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Msx2Q03358 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Msx2Q03358 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Msx2Q03358 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Msx2Q03358 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Msx2Q03358 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Msx2Q03358 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Msx2Q03358 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Msx2Q03358 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.88□□□□□ -0.51
Msx2Q03358 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Msx2Q03358 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.88□□□□□ -0.51
Msx2Q03358 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Msx2Q03358 Gm13369-201ENSMUST00000119442 987 ntBASIC11.88□□□□□ -0.51
Msx2Q03358 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.88□□□□□ -0.51
Msx2Q03358 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.88□□□□□ -0.51
Msx2Q03358 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Msx2Q03358 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Msx2Q03358 Gm26185-201ENSMUST00000157692 266 ntBASIC11.88□□□□□ -0.51
Msx2Q03358 Proscos-202ENSMUST00000178990 666 ntBASIC11.88□□□□□ -0.51
Msx2Q03358 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.88□□□□□ -0.51
Msx2Q03358 Gm37042-201ENSMUST00000193816 581 ntBASIC11.88□□□□□ -0.51
Msx2Q03358 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.88□□□□□ -0.51
Msx2Q03358 Gm38671-201ENSMUST00000200573 130 ntBASIC11.88□□□□□ -0.51
Msx2Q03358 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Msx2Q03358 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms