Protein–RNA interactions for Protein: P97452

Bop1, Ribosome biogenesis protein BOP1, mousemouse

Known RBP Predictions only

Length 732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bop1P97452 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Bop1P97452 Gm38002-201ENSMUST00000193255 180 ntBASIC12.08□□□□□ -0.48
Bop1P97452 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.08□□□□□ -0.48
Bop1P97452 Gm6458-201ENSMUST00000211573 635 ntBASIC12.08□□□□□ -0.48
Bop1P97452 Gm6013-201ENSMUST00000212264 699 ntBASIC12.08□□□□□ -0.48
Bop1P97452 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Bop1P97452 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.08□□□□□ -0.48
Bop1P97452 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Bop1P97452 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Bop1P97452 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Bop1P97452 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Bop1P97452 Snora73a-201ENSMUST00000082453 205 ntBASIC12.08□□□□□ -0.48
Bop1P97452 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Bop1P97452 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Bop1P97452 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Bop1P97452 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.08□□□□□ -0.48
Bop1P97452 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Bop1P97452 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.08□□□□□ -0.48
Bop1P97452 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Bop1P97452 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Bop1P97452 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Bop1P97452 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Bop1P97452 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.08□□□□□ -0.48
Bop1P97452 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Bop1P97452 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Bop1P97452 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Bop1P97452 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Bop1P97452 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Bop1P97452 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Bop1P97452 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Bop1P97452 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Bop1P97452 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.07□□□□□ -0.48
Bop1P97452 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Bop1P97452 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Bop1P97452 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.07□□□□□ -0.48
Bop1P97452 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.07□□□□□ -0.48
Bop1P97452 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Bop1P97452 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Bop1P97452 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Bop1P97452 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.07□□□□□ -0.48
Bop1P97452 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Bop1P97452 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Bop1P97452 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.07□□□□□ -0.48
Bop1P97452 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.07□□□□□ -0.48
Bop1P97452 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Bop1P97452 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.07□□□□□ -0.48
Bop1P97452 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.07□□□□□ -0.48
Bop1P97452 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Bop1P97452 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.07□□□□□ -0.48
Bop1P97452 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Bop1P97452 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Bop1P97452 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Bop1P97452 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Bop1P97452 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Bop1P97452 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Bop1P97452 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Bop1P97452 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Bop1P97452 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Bop1P97452 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Bop1P97452 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Bop1P97452 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Bop1P97452 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Bop1P97452 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Bop1P97452 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.07□□□□□ -0.48
Bop1P97452 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Bop1P97452 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Bop1P97452 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Bop1P97452 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Bop1P97452 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Bop1P97452 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Bop1P97452 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Bop1P97452 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Bop1P97452 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Bop1P97452 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.06□□□□□ -0.48
Bop1P97452 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Bop1P97452 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Bop1P97452 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Bop1P97452 Mir1247-201ENSMUST00000116706 82 ntBASIC12.06□□□□□ -0.48
Bop1P97452 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Bop1P97452 Gm25927-201ENSMUST00000175058 117 ntBASIC12.06□□□□□ -0.48
Bop1P97452 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Bop1P97452 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.06□□□□□ -0.48
Bop1P97452 Gm43179-201ENSMUST00000198797 275 ntBASIC12.06□□□□□ -0.48
Bop1P97452 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.06□□□□□ -0.48
Bop1P97452 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Bop1P97452 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.06□□□□□ -0.48
Bop1P97452 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Bop1P97452 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Bop1P97452 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.06□□□□□ -0.48
Bop1P97452 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Bop1P97452 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Bop1P97452 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Bop1P97452 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Bop1P97452 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.06□□□□□ -0.48
Bop1P97452 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Bop1P97452 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Bop1P97452 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Bop1P97452 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Bop1P97452 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Bop1P97452 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms