Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcdP82347 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcdP82347 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcdP82347 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
SgcdP82347 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
SgcdP82347 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
SgcdP82347 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcdP82347 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcdP82347 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcdP82347 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SgcdP82347 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcdP82347 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcdP82347 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.45□□□□□ -0.58
SgcdP82347 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcdP82347 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
SgcdP82347 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SgcdP82347 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcdP82347 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcdP82347 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcdP82347 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SgcdP82347 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SgcdP82347 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SgcdP82347 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SgcdP82347 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SgcdP82347 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SgcdP82347 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SgcdP82347 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
SgcdP82347 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SgcdP82347 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SgcdP82347 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SgcdP82347 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SgcdP82347 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SgcdP82347 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SgcdP82347 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
SgcdP82347 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.44□□□□□ -0.58
SgcdP82347 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.44□□□□□ -0.58
SgcdP82347 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SgcdP82347 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.44□□□□□ -0.58
SgcdP82347 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SgcdP82347 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
SgcdP82347 Gm12928-201ENSMUST00000117115 573 ntBASIC11.44□□□□□ -0.58
SgcdP82347 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.44□□□□□ -0.58
SgcdP82347 Gm11814-201ENSMUST00000119515 929 ntBASIC11.44□□□□□ -0.58
SgcdP82347 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.44□□□□□ -0.58
SgcdP82347 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.44□□□□□ -0.58
SgcdP82347 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.44□□□□□ -0.58
SgcdP82347 Gm37424-201ENSMUST00000191727 561 ntBASIC11.44□□□□□ -0.58
SgcdP82347 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
SgcdP82347 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SgcdP82347 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SgcdP82347 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.44□□□□□ -0.58
SgcdP82347 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SgcdP82347 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.44□□□□□ -0.58
SgcdP82347 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SgcdP82347 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SgcdP82347 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
SgcdP82347 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SgcdP82347 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.44□□□□□ -0.58
SgcdP82347 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SgcdP82347 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.44□□□□□ -0.58
SgcdP82347 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SgcdP82347 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.44□□□□□ -0.58
SgcdP82347 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
SgcdP82347 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcdP82347 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
SgcdP82347 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SgcdP82347 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcdP82347 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcdP82347 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.43□□□□□ -0.58
SgcdP82347 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcdP82347 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcdP82347 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
SgcdP82347 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
SgcdP82347 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcdP82347 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.43□□□□□ -0.58
SgcdP82347 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcdP82347 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcdP82347 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcdP82347 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.43□□□□□ -0.58
SgcdP82347 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
SgcdP82347 Gm6447-201ENSMUST00000118905 835 ntBASIC11.43□□□□□ -0.58
SgcdP82347 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcdP82347 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
SgcdP82347 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.43□□□□□ -0.58
SgcdP82347 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
SgcdP82347 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.43□□□□□ -0.58
SgcdP82347 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SgcdP82347 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SgcdP82347 Gm29649-201ENSMUST00000185649 419 ntBASIC11.43□□□□□ -0.58
SgcdP82347 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.43□□□□□ -0.58
SgcdP82347 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.43□□□□□ -0.58
SgcdP82347 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcdP82347 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.43□□□□□ -0.58
SgcdP82347 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.43□□□□□ -0.58
SgcdP82347 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.43□□□□□ -0.58
SgcdP82347 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.43□□□□□ -0.58
SgcdP82347 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcdP82347 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SgcdP82347 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcdP82347 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms