Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmgb1P63158 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.56□□□□□ -0.24
Hmgb1P63158 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmgb1P63158 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb1P63158 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Hmgb1P63158 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb1P63158 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.55□□□□□ -0.24
Hmgb1P63158 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb1P63158 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb1P63158 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb1P63158 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb1P63158 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Hmgb1P63158 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb1P63158 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.55□□□□□ -0.24
Hmgb1P63158 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb1P63158 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Hmgb1P63158 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb1P63158 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb1P63158 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.55□□□□□ -0.24
Hmgb1P63158 Gm13736-201ENSMUST00000119272 253 ntBASIC13.55□□□□□ -0.24
Hmgb1P63158 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.55□□□□□ -0.24
Hmgb1P63158 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.55□□□□□ -0.24
Hmgb1P63158 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.55□□□□□ -0.24
Hmgb1P63158 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.55□□□□□ -0.24
Hmgb1P63158 Gm17150-201ENSMUST00000165577 381 ntBASIC13.55□□□□□ -0.24
Hmgb1P63158 Gm3890-201ENSMUST00000182416 207 ntBASIC13.55□□□□□ -0.24
Hmgb1P63158 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.55□□□□□ -0.24
Hmgb1P63158 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb1P63158 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Hmgb1P63158 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Hmgb1P63158 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Hmgb1P63158 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb1P63158 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb1P63158 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb1P63158 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb1P63158 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb1P63158 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb1P63158 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.55□□□□□ -0.24
Hmgb1P63158 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Hmgb1P63158 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.55□□□□□ -0.24
Hmgb1P63158 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Hmgb1P63158 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb1P63158 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb1P63158 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC13.55□□□□□ -0.24
Hmgb1P63158 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb1P63158 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb1P63158 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.55□□□□□ -0.24
Hmgb1P63158 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb1P63158 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb1P63158 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hmgb1P63158 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hmgb1P63158 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hmgb1P63158 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hmgb1P63158 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hmgb1P63158 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hmgb1P63158 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hmgb1P63158 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hmgb1P63158 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Hmgb1P63158 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hmgb1P63158 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.54□□□□□ -0.24
Hmgb1P63158 Gm2238-201ENSMUST00000192074 3669 ntBASIC13.54□□□□□ -0.24
Hmgb1P63158 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Hmgb1P63158 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hmgb1P63158 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
Hmgb1P63158 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.54□□□□□ -0.24
Hmgb1P63158 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hmgb1P63158 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.54□□□□□ -0.24
Hmgb1P63158 Gm7809-201ENSMUST00000153199 742 ntBASIC13.54□□□□□ -0.24
Hmgb1P63158 Gm24548-201ENSMUST00000158650 108 ntBASIC13.54□□□□□ -0.24
Hmgb1P63158 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.54□□□□□ -0.24
Hmgb1P63158 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Hmgb1P63158 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.54□□□□□ -0.24
Hmgb1P63158 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.54□□□□□ -0.24
Hmgb1P63158 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.54□□□□□ -0.24
Hmgb1P63158 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.54□□□□□ -0.24
Hmgb1P63158 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.54□□□□□ -0.24
Hmgb1P63158 Gm10076-201ENSMUST00000073238 384 ntBASIC13.54□□□□□ -0.24
Hmgb1P63158 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Hmgb1P63158 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hmgb1P63158 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hmgb1P63158 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hmgb1P63158 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.54□□□□□ -0.24
Hmgb1P63158 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hmgb1P63158 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Hmgb1P63158 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hmgb1P63158 Map1b-203ENSMUST00000223725 2669 ntBASIC13.54□□□□□ -0.24
Hmgb1P63158 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.54□□□□□ -0.24
Hmgb1P63158 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hmgb1P63158 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hmgb1P63158 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hmgb1P63158 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hmgb1P63158 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hmgb1P63158 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hmgb1P63158 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Hmgb1P63158 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hmgb1P63158 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hmgb1P63158 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hmgb1P63158 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hmgb1P63158 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Hmgb1P63158 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms