Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Ybx1P62960 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.39
Ybx1P62960 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ybx1P62960 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ybx1P62960 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ybx1P62960 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.58□□□□□ -0.4
Ybx1P62960 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ybx1P62960 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ybx1P62960 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ybx1P62960 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.58□□□□□ -0.4
Ybx1P62960 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ybx1P62960 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ybx1P62960 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ybx1P62960 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ybx1P62960 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ybx1P62960 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Ybx1P62960 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ybx1P62960 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ybx1P62960 Gm11941-201ENSMUST00000119904 610 ntBASIC12.58□□□□□ -0.4
Ybx1P62960 Gm12196-201ENSMUST00000120954 262 ntBASIC12.58□□□□□ -0.4
Ybx1P62960 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
Ybx1P62960 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ybx1P62960 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.58□□□□□ -0.4
Ybx1P62960 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ybx1P62960 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ybx1P62960 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Ybx1P62960 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.58□□□□□ -0.4
Ybx1P62960 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ybx1P62960 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ybx1P62960 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ybx1P62960 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ybx1P62960 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ybx1P62960 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ybx1P62960 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ybx1P62960 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ybx1P62960 Gm44999-201ENSMUST00000207456 1493 ntBASIC12.58□□□□□ -0.4
Ybx1P62960 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.58□□□□□ -0.4
Ybx1P62960 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ybx1P62960 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ybx1P62960 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ybx1P62960 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.57□□□□□ -0.4
Ybx1P62960 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ybx1P62960 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Ybx1P62960 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ybx1P62960 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ybx1P62960 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ybx1P62960 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ybx1P62960 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ybx1P62960 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ybx1P62960 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.57□□□□□ -0.4
Ybx1P62960 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ybx1P62960 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ybx1P62960 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ybx1P62960 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ybx1P62960 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ybx1P62960 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ybx1P62960 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ybx1P62960 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.57□□□□□ -0.4
Ybx1P62960 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ybx1P62960 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Ybx1P62960 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ybx1P62960 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Ybx1P62960 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.57□□□□□ -0.4
Ybx1P62960 Gm14665-201ENSMUST00000122294 557 ntBASIC12.57□□□□□ -0.4
Ybx1P62960 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC12.57□□□□□ -0.4
Ybx1P62960 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ybx1P62960 Mir7677-201ENSMUST00000184226 67 ntBASIC12.57□□□□□ -0.4
Ybx1P62960 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.57□□□□□ -0.4
Ybx1P62960 AC122876.1-201ENSMUST00000217619 825 ntBASIC12.57□□□□□ -0.4
Ybx1P62960 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ybx1P62960 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.57□□□□□ -0.4
Ybx1P62960 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Ybx1P62960 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ybx1P62960 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.57□□□□□ -0.4
Ybx1P62960 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ybx1P62960 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Ybx1P62960 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ybx1P62960 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ybx1P62960 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.57□□□□□ -0.4
Ybx1P62960 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ybx1P62960 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ybx1P62960 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ybx1P62960 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ybx1P62960 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ybx1P62960 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ybx1P62960 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.57□□□□□ -0.4
Ybx1P62960 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ybx1P62960 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.57□□□□□ -0.4
Ybx1P62960 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.57□□□□□ -0.4
Ybx1P62960 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ybx1P62960 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.57□□□□□ -0.4
Ybx1P62960 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ybx1P62960 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ybx1P62960 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.56□□□□□ -0.4
Ybx1P62960 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ybx1P62960 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ybx1P62960 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ybx1P62960 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ybx1P62960 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ybx1P62960 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms