Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a1P61620 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a1P61620 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a1P61620 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a1P61620 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC10.85□□□□□ -0.67
Sec61a1P61620 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a1P61620 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Sec61a1P61620 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a1P61620 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC10.85□□□□□ -0.67
Sec61a1P61620 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a1P61620 Gm44831-201ENSMUST00000208469 2989 ntBASIC10.85□□□□□ -0.67
Sec61a1P61620 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Sec61a1P61620 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a1P61620 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Sec61a1P61620 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a1P61620 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a1P61620 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a1P61620 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a1P61620 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a1P61620 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a1P61620 Mir686-201ENSMUST00000102174 109 ntBASIC10.85□□□□□ -0.67
Sec61a1P61620 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a1P61620 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC10.85□□□□□ -0.67
Sec61a1P61620 Gm27514-201ENSMUST00000183692 110 ntBASIC10.85□□□□□ -0.67
Sec61a1P61620 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC10.85□□□□□ -0.67
Sec61a1P61620 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC10.85□□□□□ -0.67
Sec61a1P61620 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a1P61620 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a1P61620 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a1P61620 Gm10478-201ENSMUST00000084451 396 ntBASIC10.85□□□□□ -0.67
Sec61a1P61620 Gm10268-201ENSMUST00000085340 555 ntBASIC10.85□□□□□ -0.67
Sec61a1P61620 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a1P61620 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a1P61620 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a1P61620 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a1P61620 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a1P61620 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a1P61620 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC10.85□□□□□ -0.67
Sec61a1P61620 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a1P61620 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a1P61620 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a1P61620 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a1P61620 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.85□□□□□ -0.67
Sec61a1P61620 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a1P61620 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a1P61620 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a1P61620 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a1P61620 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a1P61620 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a1P61620 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a1P61620 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Sec61a1P61620 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a1P61620 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a1P61620 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a1P61620 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a1P61620 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a1P61620 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a1P61620 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC10.84□□□□□ -0.67
Sec61a1P61620 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a1P61620 Gm5187-201ENSMUST00000117317 991 ntBASIC10.84□□□□□ -0.67
Sec61a1P61620 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a1P61620 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC10.84□□□□□ -0.67
Sec61a1P61620 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC10.84□□□□□ -0.67
Sec61a1P61620 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a1P61620 Gm42693-201ENSMUST00000196779 631 ntBASIC10.84□□□□□ -0.67
Sec61a1P61620 Gm6007-201ENSMUST00000208170 823 ntBASIC10.84□□□□□ -0.67
Sec61a1P61620 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a1P61620 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.84□□□□□ -0.67
Sec61a1P61620 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a1P61620 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a1P61620 Gm12846-201ENSMUST00000120431 1373 ntBASIC10.84□□□□□ -0.67
Sec61a1P61620 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a1P61620 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a1P61620 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Sec61a1P61620 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a1P61620 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a1P61620 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a1P61620 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a1P61620 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a1P61620 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a1P61620 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Sec61a1P61620 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a1P61620 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a1P61620 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a1P61620 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a1P61620 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a1P61620 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a1P61620 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a1P61620 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
Sec61a1P61620 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a1P61620 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a1P61620 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a1P61620 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Sec61a1P61620 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a1P61620 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.83□□□□□ -0.68
Sec61a1P61620 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Sec61a1P61620 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Sec61a1P61620 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a1P61620 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.83□□□□□ -0.68
Sec61a1P61620 Gm8617-201ENSMUST00000118796 2222 ntBASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 116.2 ms