Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nphp4P59240 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nphp4P59240 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC16.48■□□□□ 0.23
Nphp4P59240 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nphp4P59240 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nphp4P59240 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Nphp4P59240 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nphp4P59240 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nphp4P59240 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nphp4P59240 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nphp4P59240 Gm14441-201ENSMUST00000121960 540 ntBASIC16.47■□□□□ 0.23
Nphp4P59240 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC16.47■□□□□ 0.23
Nphp4P59240 Gm4726-201ENSMUST00000135604 736 ntBASIC16.47■□□□□ 0.23
Nphp4P59240 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nphp4P59240 Gm6019-201ENSMUST00000148369 736 ntBASIC16.47■□□□□ 0.23
Nphp4P59240 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nphp4P59240 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC16.47■□□□□ 0.23
Nphp4P59240 Gm7940-201ENSMUST00000218195 769 ntBASIC16.47■□□□□ 0.23
Nphp4P59240 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Nphp4P59240 AC171241.1-201ENSMUST00000228144 1166 ntBASIC16.47■□□□□ 0.23
Nphp4P59240 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nphp4P59240 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nphp4P59240 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nphp4P59240 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nphp4P59240 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nphp4P59240 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nphp4P59240 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nphp4P59240 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nphp4P59240 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nphp4P59240 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nphp4P59240 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nphp4P59240 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nphp4P59240 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC16.46■□□□□ 0.23
Nphp4P59240 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Nphp4P59240 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Nphp4P59240 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nphp4P59240 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nphp4P59240 Gm14193-201ENSMUST00000105067 153 ntBASIC16.46■□□□□ 0.23
Nphp4P59240 Gm14314-201ENSMUST00000118225 1015 ntBASIC16.46■□□□□ 0.23
Nphp4P59240 Gm14460-201ENSMUST00000121511 639 ntBASIC16.46■□□□□ 0.23
Nphp4P59240 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC16.46■□□□□ 0.23
Nphp4P59240 Gm23045-201ENSMUST00000175041 96 ntBASIC16.46■□□□□ 0.23
Nphp4P59240 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nphp4P59240 Gm37458-201ENSMUST00000194055 410 ntBASIC16.46■□□□□ 0.23
Nphp4P59240 Gm8365-201ENSMUST00000197334 648 ntBASIC16.46■□□□□ 0.23
Nphp4P59240 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Nphp4P59240 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Nphp4P59240 AC153929.1-201ENSMUST00000219009 303 ntBASIC16.46■□□□□ 0.23
Nphp4P59240 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nphp4P59240 Gm8522-201ENSMUST00000118416 1929 ntBASIC16.46■□□□□ 0.23
Nphp4P59240 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nphp4P59240 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Nphp4P59240 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC16.46■□□□□ 0.23
Nphp4P59240 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nphp4P59240 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC16.46■□□□□ 0.23
Nphp4P59240 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Nphp4P59240 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nphp4P59240 Gm9947-201ENSMUST00000067599 2920 ntBASIC16.46■□□□□ 0.23
Nphp4P59240 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nphp4P59240 Gm42748-201ENSMUST00000199354 2341 ntBASIC16.46■□□□□ 0.23
Nphp4P59240 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Nphp4P59240 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Nphp4P59240 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Nphp4P59240 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC16.45■□□□□ 0.22
Nphp4P59240 Gm6114-201ENSMUST00000182472 968 ntBASIC16.45■□□□□ 0.22
Nphp4P59240 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nphp4P59240 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC16.45■□□□□ 0.22
Nphp4P59240 Gm42599-201ENSMUST00000201308 469 ntBASIC16.45■□□□□ 0.22
Nphp4P59240 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC16.45■□□□□ 0.22
Nphp4P59240 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC16.45■□□□□ 0.22
Nphp4P59240 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Nphp4P59240 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nphp4P59240 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Nphp4P59240 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC16.45■□□□□ 0.22
Nphp4P59240 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nphp4P59240 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nphp4P59240 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nphp4P59240 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nphp4P59240 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nphp4P59240 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nphp4P59240 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nphp4P59240 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Nphp4P59240 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nphp4P59240 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Nphp4P59240 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Nphp4P59240 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nphp4P59240 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nphp4P59240 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC16.45■□□□□ 0.22
Nphp4P59240 CT009489.1-201ENSMUST00000227740 1893 ntBASIC16.45■□□□□ 0.22
Nphp4P59240 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nphp4P59240 Gm11956-201ENSMUST00000119525 512 ntBASIC16.45■□□□□ 0.22
Nphp4P59240 Gm11246-201ENSMUST00000120880 345 ntBASIC16.45■□□□□ 0.22
Nphp4P59240 Gm43186-201ENSMUST00000198130 824 ntBASIC16.45■□□□□ 0.22
Nphp4P59240 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nphp4P59240 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nphp4P59240 Gm9132-201ENSMUST00000210182 832 ntBASIC16.45■□□□□ 0.22
Nphp4P59240 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Nphp4P59240 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nphp4P59240 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nphp4P59240 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms